Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89281 | Sorghum | cytosol | 56.32 | 64.85 |
| HORVU1Hr1G000550.2 | Barley | cytosol | 65.44 | 63.65 |
| TraesCS5D01G186900.1 | Wheat | cytosol | 72.11 | 63.52 |
| HORVU5Hr1G055740.1 | Barley | plasma membrane | 71.58 | 63.45 |
| OQU89285 | Sorghum | plastid | 67.54 | 63.01 |
| TraesCS5B01G180500.1 | Wheat | cytosol | 72.46 | 61.55 |
| Zm00001d020069_P002 | Maize | plastid | 59.3 | 60.47 |
| Os08t0371608-00 | Rice | cytosol | 52.11 | 54.7 |
| Os08t0369800-01 | Rice | plastid | 33.16 | 49.48 |
| Os06t0162550-00 | Rice | mitochondrion, plastid | 40.35 | 40.21 |
| Os12t0640600-01 | Rice | plasma membrane | 24.91 | 26.3 |
| Os04t0131800-00 | Rice | extracellular | 7.54 | 24.86 |
| Os12t0617400-01 | Rice | cytosol | 12.11 | 24.38 |
| Os12t0435200-01 | Rice | plastid | 23.68 | 23.44 |
| Os03t0645900-00 | Rice | plastid | 24.21 | 22.7 |
| Os07t0154100-01 | Rice | plastid | 22.98 | 22.51 |
| Os02t0704000-01 | Rice | plastid | 23.68 | 21.16 |
Protein Annotations
| EnsemblPlants:Os09t0321200-00 | EnsemblPlantsGene:Os09g0321200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:Carotenoid_Oase | PANTHER:PTHR10543 |
| PANTHER:PTHR10543:SF30 | PFAM:PF03055 | ProteinID:BAT07435.1 | UniParc:UPI0003938C5F | UniProt:A0A0P0XLA9 | MapMan:35.1 |
Description
Similar to carotenoid cleavage dioxygenase. (Os09t0321200-00)
Coordinates
chr9:-:9251224..9255066
Molecular Weight (calculated)
63637.4 Da
IEP (calculated)
5.488
GRAVY (calculated)
-0.250
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTASLHPCV CKASPAFRPA SSLGARTQPK STATNPKRPL FQELQRRLSF RIDEASKALE TAKQGLLDAL VDSTFKFSDQ PMLPSENNFA PVNEISEAIE
101: ILQIEGEIPE DFPEGVYIRN GSNPLFGALH STVSIFGKSS EIWVEGEGML HAIYFTKNSS DTWSVSYANR YVQSETLKIE KTRQKPCFLP AIMGDSAAIV
201: AAYILNYMRF GKVNKNISNT NVFEHAGKVY AVSENHLPQE ISIQNLDTGD SWDINGEWKR PFTAHPKVAP GSGELVIFGS DAKRPFLMVG VVSADGTQLK
301: HKVDLKLDRC ILCHDIGVTV KYNIIMDIPL TIDISRLIRG NQLIKFEKDS YARIGVMPRY GDAESVMWFD VEPFCMFHFI NCFEEGDEVV IRGFRAADSI
401: IPGPRISLNK NDLLSDPSKC SVKQGINEEF FSRLYQWRLN TKTKAVSGQY LSGTEFSMEF PVINDHYTGL HHSYAYAQVV DSLESSYGVN EKVILKYGGL
501: AKLCLEEADN VIAETSEDLI KTEYHGFGED QFFSGAAFVP RVGGSHEDDG WIISFVHDER SNTSQASAHY
101: ILQIEGEIPE DFPEGVYIRN GSNPLFGALH STVSIFGKSS EIWVEGEGML HAIYFTKNSS DTWSVSYANR YVQSETLKIE KTRQKPCFLP AIMGDSAAIV
201: AAYILNYMRF GKVNKNISNT NVFEHAGKVY AVSENHLPQE ISIQNLDTGD SWDINGEWKR PFTAHPKVAP GSGELVIFGS DAKRPFLMVG VVSADGTQLK
301: HKVDLKLDRC ILCHDIGVTV KYNIIMDIPL TIDISRLIRG NQLIKFEKDS YARIGVMPRY GDAESVMWFD VEPFCMFHFI NCFEEGDEVV IRGFRAADSI
401: IPGPRISLNK NDLLSDPSKC SVKQGINEEF FSRLYQWRLN TKTKAVSGQY LSGTEFSMEF PVINDHYTGL HHSYAYAQVV DSLESSYGVN EKVILKYGGL
501: AKLCLEEADN VIAETSEDLI KTEYHGFGED QFFSGAAFVP RVGGSHEDDG WIISFVHDER SNTSQASAHY
001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
Arabidopsis Description
CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.