Factsheet for Zm00001d020069_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89285	Sorghum	plastid	81.4	74.47
Os09t0321200-00	Rice	plastid	60.47	59.3
HORVU1Hr1G000550.2	Barley	cytosol	60.64	57.85
HORVU5Hr1G055740.1	Barley	plasma membrane	65.12	56.61
TraesCS5D01G186900.1	Wheat	cytosol	65.12	56.26
TraesCS5B01G180500.1	Wheat	cytosol	65.83	54.84
Zm00001d045232_P001	Maize	plastid	40.61	37.03
Zm00001d034075_P001	Maize	cytosol	2.33	36.11
Zm00001d008638_P001	Maize	cytosol	4.47	30.49
Zm00001d027690_P001	Maize	cytosol	3.94	28.57
Zm00001d023690_P001	Maize	cytosol	6.44	27.48
Zm00001d000157_P001	Maize	cytosol	5.01	26.67
Zm00001d048373_P002	Maize	cytosol, plasma membrane	24.69	25.09
Zm00001d000095_P001	Maize	cytosol	7.33	25.0
Zm00001d031086_P001	Maize	plastid	25.04	24.6
Zm00001d018819_P001	Maize	plastid	24.87	24.26
Zm00001d007876_P001	Maize	plastid	24.87	24.17
Zm00001d041319_P001	Maize	plastid	25.76	23.84
Zm00001d023458_P001	Maize	cytosol	5.72	22.7
Zm00001d033222_P001	Maize	extracellular	24.51	22.68
Zm00001d013689_P001	Maize	plastid	23.97	22.3
Zm00001d051556_P001	Maize	plastid	25.4	22.26
Zm00001d017766_P001	Maize	plastid	24.69	21.6
Zm00001d042076_P001	Maize	cytosol, plastid	13.77	18.33
Zm00001d035724_P001	Maize	plastid	18.96	16.69
Zm00001d022623_P001	Maize	cytosol	10.73	16.09
Zm00001d019813_P001	Maize	plastid	5.37	15.87
Zm00001d027592_P001	Maize	mitochondrion	11.81	15.49
Zm00001d009286_P001	Maize	plastid	6.08	13.49
Zm00001d033377_P001	Maize	plastid	6.08	11.97

Protein Annotations

EnsemblPlants:Zm00001d020069_P002	EnsemblPlants:Zm00001d020069_T002	EnsemblPlantsGene:Zm00001d020069	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016702	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114
InterPro:Carotenoid_Oase	PANTHER:PTHR10543	PANTHER:PTHR10543:SF30	PFAM:PF03055	ProteinID:ONM54206.1	UniParc:UPI000844C1B2
UniProt:A0A1D6I1X3	MapMan:35.1	:	:	:	:

Description

Carotenoid cleavage dioxygenase

Coordinates

chr7:-:90083031..90086477

Molecular Weight (calculated)

61454.6 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.233

Length

559 amino acids

Sequence
(BLAST)

001: MKASAPFSTS QPLSCRTHGG RPSSMSMSAG ARTATSVGTS SKRPWFGDLL GRLSSTMDGA SRALKDAPQR FLDALVDATF RFTDQALNSA ESNFAPVDET
101: GEAIEIHQSQ IQGAIPDGFP EGVYIRNGSN PLFGALHSTS SVLGQSREIW VEGEGMLHAV YFTKSSAGHL WSVSYASRYV QSETLELETA RHKPCFLPAV
201: EGDSAAIVAA YVFNYLRFGK VSKDISNTNV FEHSGRVFAV AENSLPYEIC VGSLDTRDAW DVGGEWDRPF TAHPKVAPGS GELVIFGTDA KKPFLVVGVV
301: SADGTKLKHR ADLKLDRCTL CHDIGVTPKH NVIMDIPLTM DVGRIVKGGQ LIQFEKESYA RIGVMPRYGD ADSAVWFDVE PFCMFHLVNC FEEGDEVVVQ
401: ALRSPDSIIP GSTIALDKLD SEMPEVAGDD KPAKRPTAEE FFFRLYQWRL NLRTRSVSGE YLSGTDYSLE FPIISSQYTG LQHRYAYAQV VDSCGNCGKV
501: NPKYGGFAKF YLDERSNAEV HIVDAKRFED APVAKITFPR RVPYGFHGTF VSKKMNDVM

Best Arabidopsis Sequence Match ( AT3G63520.1 )
(BLAST)

001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI

Arabidopsis Description

CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.