Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G108100.2 | Barley | plasma membrane, plastid | 64.46 | 58.72 |
| Os09t0321200-00 | Rice | plastid | 54.7 | 52.11 |
| Os08t0369800-01 | Rice | plastid | 36.65 | 52.09 |
| Os06t0162550-00 | Rice | mitochondrion, plastid | 39.23 | 37.24 |
| Os12t0617400-01 | Rice | cytosol | 11.6 | 22.26 |
| Os12t0640600-01 | Rice | plasma membrane | 21.73 | 21.85 |
| Os03t0645900-00 | Rice | plastid | 23.39 | 20.89 |
| Os12t0435200-01 | Rice | plastid | 21.92 | 20.66 |
| Os07t0154100-01 | Rice | plastid | 21.73 | 20.27 |
| Os02t0704000-01 | Rice | plastid | 21.73 | 18.5 |
| Os04t0131800-00 | Rice | extracellular | 5.71 | 17.92 |
Protein Annotations
| EnsemblPlants:Os08t0371608-00 | EnsemblPlantsGene:Os08g0371608 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 | InterPro:Carotenoid_Oase |
| PANTHER:PTHR10543 | PANTHER:PTHR10543:SF83 | PFAM:PF03055 | ProteinID:BAT05166.1 | UniParc:UPI000393BEB8 | UniProt:A0A0P0XF96 |
| MapMan:35.1 | : | : | : | : | : |
Description
Similar to carotenoid cleavage dioxygenase. (Os08t0371608-00)
Coordinates
chr8:-:17338752..17351892
Molecular Weight (calculated)
61196.8 Da
IEP (calculated)
5.693
GRAVY (calculated)
-0.231
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: LRCRYIYLQP HFKEFQQQLT TKLGEASAAV TMASSLLLDA FVDSTFTFSH QSLRPTESNF APVDEIGGRT EIWRIEGTIS DDFPEGVYIR NGSNPLFGAL
101: HKVNSIFGQS EDIWVEGEGM LHALYFTKSR EGNTWSVSYN NRYVQSDTFN TERDRQRPCF LSAIKGDPLA IIAASILNML RFGKVFRNMS NTGVFEHAER
201: VFSVAENDIP YEIDLDNLGT LCSWVVDGQW NMPFTAHPKV APGSGELVIY GFNIVKPFLT IGVVSEDGKK LERKVDLKLE RCTYCHEIGV TKMYNIIMDM
301: PLTVDLTRIL RGAPLIDFET ESYARIGVMP RHGDADSVIW FDVEPFCTLH LINCFEEDHE VVIRGFRVPG SIITGITLEH TANEEPANQG PSEKSFPRLY
401: EWRLNMKSRA VTGKYLTGTD VALEFPVINN KYAGLHHKYA YAQVIDVQGS LEGGCGTVRP KFGGFAKLHL QDNNKFGGDL INVEYHHLGK NQFCSGATFV
501: PKVNGANEDD GWIISFVHDE EINTSQAHMS LMLRDLKMDQ LLR
101: HKVNSIFGQS EDIWVEGEGM LHALYFTKSR EGNTWSVSYN NRYVQSDTFN TERDRQRPCF LSAIKGDPLA IIAASILNML RFGKVFRNMS NTGVFEHAER
201: VFSVAENDIP YEIDLDNLGT LCSWVVDGQW NMPFTAHPKV APGSGELVIY GFNIVKPFLT IGVVSEDGKK LERKVDLKLE RCTYCHEIGV TKMYNIIMDM
301: PLTVDLTRIL RGAPLIDFET ESYARIGVMP RHGDADSVIW FDVEPFCTLH LINCFEEDHE VVIRGFRVPG SIITGITLEH TANEEPANQG PSEKSFPRLY
401: EWRLNMKSRA VTGKYLTGTD VALEFPVINN KYAGLHHKYA YAQVIDVQGS LEGGCGTVRP KFGGFAKLHL QDNNKFGGDL INVEYHHLGK NQFCSGATFV
501: PKVNGANEDD GWIISFVHDE EINTSQAHMS LMLRDLKMDQ LLR
001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
Arabidopsis Description
CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.