Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18260611
plasma membrane: 18557835 plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048373_P002 | Maize | cytosol, plasma membrane | 90.37 | 88.73 |
| OQU93261 | Sorghum | cytosol | 89.26 | 88.6 |
| TraesCS5D01G001900.1 | Wheat | cytosol, golgi | 90.0 | 88.52 |
| TraesCS5B01G002600.2 | Wheat | cytosol, golgi, plastid | 89.81 | 88.5 |
| TraesCS5A01G001500.2 | Wheat | cytosol | 89.63 | 88.32 |
| HORVU5Hr1G000320.9 | Barley | plastid | 89.81 | 85.54 |
| TraesCS5D01G002800.1 | Wheat | cytosol | 85.37 | 83.67 |
| TraesCS5B01G001800.1 | Wheat | cytosol | 82.96 | 82.96 |
| HORVU4Hr1G006300.1 | Barley | cytosol | 83.89 | 81.62 |
| TraesCS5A01G002400.1 | Wheat | cytosol | 85.0 | 81.53 |
| TraesCS5A01G002200.1 | Wheat | cytosol | 78.33 | 79.96 |
| GSMUA_Achr3P29770_001 | Banana | cytosol, plasma membrane | 80.93 | 79.89 |
| Zm00001d034075_P001 | Maize | cytosol | 5.19 | 77.78 |
| CDX93902 | Canola | cytosol | 75.56 | 77.71 |
| VIT_13s0064g00810.t01 | Wine grape | cytosol | 73.33 | 77.65 |
| CDY53711 | Canola | cytosol | 75.0 | 77.14 |
| AT3G63520.1 | Thale cress | cytosol | 76.11 | 76.39 |
| Solyc01g087250.2.1 | Tomato | cytosol, plastid | 77.04 | 76.33 |
| VIT_13s0064g00840.t01 | Wine grape | extracellular | 75.74 | 74.91 |
| Solyc01g087260.2.1 | Tomato | plastid | 73.89 | 73.21 |
| TraesCS5D01G002900.1 | Wheat | plastid | 82.78 | 72.8 |
| CDY34748 | Canola | endoplasmic reticulum, extracellular | 65.0 | 72.67 |
| CDY34746 | Canola | cytosol | 16.85 | 71.09 |
| KRH27468 | Soybean | endoplasmic reticulum, mitochondrion | 70.74 | 70.74 |
| Bra040449.1-P | Field mustard | cytosol | 70.56 | 69.65 |
| KRH20815 | Soybean | cytosol, endoplasmic reticulum, extracellular | 73.33 | 68.99 |
| Bra007826.1-P | Field mustard | plastid | 70.0 | 63.11 |
| CDX76782 | Canola | mitochondrion | 69.63 | 61.44 |
| CDX76783 | Canola | plastid | 69.44 | 61.37 |
| Bra007825.1-P | Field mustard | plastid | 60.19 | 56.52 |
| CDY34747 | Canola | cytosol | 13.89 | 55.56 |
| Os12t0617400-01 | Rice | cytosol | 19.07 | 36.4 |
| Os07t0154100-01 | Rice | plastid | 37.78 | 35.05 |
| Os03t0645900-00 | Rice | plastid | 39.07 | 34.7 |
| Os12t0435200-01 | Rice | plastid | 34.63 | 32.47 |
| Os02t0704000-01 | Rice | plastid | 35.37 | 29.94 |
| Os04t0131800-00 | Rice | extracellular | 9.44 | 29.48 |
| Os06t0162550-00 | Rice | mitochondrion, plastid | 26.67 | 25.17 |
| Os09t0321200-00 | Rice | plastid | 26.3 | 24.91 |
| Os08t0371608-00 | Rice | cytosol | 21.85 | 21.73 |
| Os08t0369800-01 | Rice | plastid | 14.63 | 20.68 |
Protein Annotations
| EntrezGene:4352923 | MapMan:9.1.6.3.1 | UniProt:A0A0P0YD24 | ProteinID:BAT18301.1 | InterPro:Carotenoid_Oase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016118 |
| GO:GO:0016121 | GO:GO:0016124 | GO:GO:0016702 | GO:GO:0045549 | GO:GO:0046872 | GO:GO:0051213 |
| GO:GO:0055114 | EnsemblPlantsGene:Os12g0640600 | EnsemblPlants:Os12t0640600-01 | PFAM:PF03055 | PANTHER:PTHR10543 | PANTHER:PTHR10543:SF37 |
| UniParc:UPI0003938E85 | RefSeq:XP_015619349.1 | SEG:seg | : | : | : |
Description
carotenoid cleavage dioxygenase 1Similar to Carotenoid cleavage dioxygenase (Fragment). (Os12t0640600-01)
Coordinates
chr12:+:27464832..27471667
Molecular Weight (calculated)
60954.0 Da
IEP (calculated)
6.176
GRAVY (calculated)
-0.311
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGDGDEVL LLPEPRPRRG LASWALDLLE RAAVRLGHDA SKPLYWLSGN FAPVHHETPP APALPVRGHL PECLNGEFVR VGPNPKFVPV AGYHWFDGDG
101: MIHAMRIKDG KATYVSRYVK TSRLKQEEYF GGAKFMKIGD LKGFYGLFMV QMQQLRKKLK VLDFTYGHGT ANTALIYHHG KLMALSEADK PYVVKVLEDG
201: DLQTLGLLDY DKRLKHSFTA HPKVDPFTDE MFAFGYSHEP PYCTYRVITK DGAMLDPVPI TIPESVMMHD FAITENYSIF MDLPLLFRPK EMVKNGEFIY
301: KFDPTKKARF GILQRYEKDD TNIRWFELPN CFIFHNANAW EEGDEVILIT CRLENPDLDK VNGYQSDNLE NFGNELYEMR FNMKTGAASQ KQLSVSAVDF
401: PRINESYTGR KQRYVYCAIL NSIAKVAGII KFDLHAEPEI SGMKQLEVGG NVRGIFDLGP GRFGSEAIFV PREPGVSGEE DDGYLIFFVH DENTGKSEVN
501: VIDAKTMSAD PVAVVELPSR VPYGFHAFFI NEEQLAKQSA
101: MIHAMRIKDG KATYVSRYVK TSRLKQEEYF GGAKFMKIGD LKGFYGLFMV QMQQLRKKLK VLDFTYGHGT ANTALIYHHG KLMALSEADK PYVVKVLEDG
201: DLQTLGLLDY DKRLKHSFTA HPKVDPFTDE MFAFGYSHEP PYCTYRVITK DGAMLDPVPI TIPESVMMHD FAITENYSIF MDLPLLFRPK EMVKNGEFIY
301: KFDPTKKARF GILQRYEKDD TNIRWFELPN CFIFHNANAW EEGDEVILIT CRLENPDLDK VNGYQSDNLE NFGNELYEMR FNMKTGAASQ KQLSVSAVDF
401: PRINESYTGR KQRYVYCAIL NSIAKVAGII KFDLHAEPEI SGMKQLEVGG NVRGIFDLGP GRFGSEAIFV PREPGVSGEE DDGYLIFFVH DENTGKSEVN
501: VIDAKTMSAD PVAVVELPSR VPYGFHAFFI NEEQLAKQSA
001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
Arabidopsis Description
CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.