Factsheet for Bra040449.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53711	Canola	cytosol	90.86	94.67
VIT_13s0064g00810.t01	Wine grape	cytosol	70.38	75.49
VIT_13s0064g00840.t01	Wine grape	extracellular	74.04	74.18
Solyc01g087250.2.1	Tomato	cytosol, plastid	72.21	72.48
GSMUA_Achr3P29770_001	Banana	cytosol, plasma membrane	71.85	71.85
KRH27468	Soybean	endoplasmic reticulum, mitochondrion	69.84	70.74
TraesCS5D01G001900.1	Wheat	cytosol, golgi	70.93	70.67
OQU93261	Sorghum	cytosol	70.2	70.59
Os12t0640600-01	Rice	plasma membrane	69.65	70.56
Bra007826.1-P	Field mustard	plastid	77.15	70.45
TraesCS5A01G001500.2	Wheat	cytosol	70.57	70.44
TraesCS5B01G002600.2	Wheat	cytosol, golgi, plastid	70.38	70.26
KRH20815	Soybean	cytosol, endoplasmic reticulum, extracellular	73.31	69.86
Zm00001d048373_P002	Maize	cytosol, plasma membrane	69.84	69.45
Solyc01g087260.2.1	Tomato	plastid	68.74	68.99
HORVU5Hr1G000320.9	Barley	plastid	70.75	68.25
Zm00001d034075_P001	Maize	cytosol	4.39	66.67
TraesCS5B01G001800.1	Wheat	cytosol	65.63	66.48
TraesCS5D01G002800.1	Wheat	cytosol	66.91	66.42
HORVU4Hr1G006300.1	Barley	cytosol	66.36	65.41
Bra007825.1-P	Field mustard	plastid	68.19	64.87
TraesCS5A01G002400.1	Wheat	cytosol	66.54	64.65
TraesCS5A01G002200.1	Wheat	cytosol	61.79	63.89
TraesCS5D01G002900.1	Wheat	plastid	64.53	57.49
Bra013378.1-P	Field mustard	peroxisome	33.82	36.71
Bra001552.1-P	Field mustard	cytosol	26.33	36.36
Bra012603.1-P	Field mustard	cytosol	26.51	32.81
Bra008358.1-P	Field mustard	plastid	33.64	31.35
Bra020970.1-P	Field mustard	plastid	32.36	31.22
Bra021558.1-P	Field mustard	plastid	33.64	30.77
Bra035033.1-P	Field mustard	plastid	33.82	30.73
Bra032359.1-P	Field mustard	plastid	32.72	30.44
Bra015002.1-P	Field mustard	plastid	32.18	30.09
Bra027336.1-P	Field mustard	plastid	32.18	29.48
Bra013298.1-P	Field mustard	plastid	29.8	28.06

Protein Annotations

EnsemblPlants:Bra040449.1	EnsemblPlants:Bra040449.1-P	EnsemblPlantsGene:Bra040449	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114	InterPro:Carotenoid_Oase
PANTHER:PTHR10543	PANTHER:PTHR10543:SF37	PFAM:PF03055	SEG:seg	UniParc:UPI0002545267	UniProt:M4FH71
MapMan:9.1.6.3.1	:	:	:	:	:

Description

AT3G63520 (E=1e-188) CCD1, ATCCD1, ATNCED1, NCED1 | CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1); 9-cis-epoxycarotenoid dioxygenase

Coordinates

chrA04:+:91534..94455

Molecular Weight (calculated)

61992.2 Da

IEP (calculated)

6.757

GRAVY (calculated)

-0.210

Length

547 amino acids

Sequence
(BLAST)

001: MAENCIVSVN PKPSKGLSSK LLDLVERVVV KLMHDASLPL HYLSGNFAPV RDETPPVKDL PVVHGFLPEC LNGEFVRVGP NPKFDGDGMI HAVRIKDGKA
101: TYVSRYVKTS RLKQEEFFGA PKFMKIGDLK GLLGLLMVYL QQLRTKLKVL DVSYGHGTDV VKVLEDGDLQ TLGMMDYDKR LTHSFTAHPK VDPTTGEMFT
201: FGYSQTPPYL TYRVISEDGF MHDPVPITIS EPIMMHDFAI TETYAIFMDL PMHFRPKEMV KEKKMVYSFD PTKKARFGVL PRYAKDELMI RWFELPNCFI
301: FHNANAWEEE DEVVLITCRL ENPDLDMVGG DAKEKLENFS NELYEMRFNM KTGSASQKKL SPSAVDFPRI NECYTGKKQR YVYGTILDSI AKVTGIIKFD
401: LHAEAETGKE ILEVGGNIKG IYELGQGRYG SEAIYVPREA GEEDDGYLIF FVHDENTGKS CVNVIDAKTM SAEPVAVVEL PHRVPYGFHA FFVTEVLKPK
501: PIIIYIFFTR DATLTTRGSC LGRNNSRNKL LHKTSCVHNY IICYMLL

Best Arabidopsis Sequence Match ( AT3G63520.1 )
(BLAST)

001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI

Arabidopsis Description

CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.