Factsheet for HORVU5Hr1G000320.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G001500.2	Wheat	cytosol	92.95	96.17
TraesCS5D01G001900.1	Wheat	cytosol, golgi	92.77	95.81
TraesCS5B01G002600.2	Wheat	cytosol, golgi, plastid	92.59	95.8
Os12t0640600-01	Rice	plasma membrane	85.54	89.81
OQU93261	Sorghum	cytosol	85.54	89.15
Zm00001d048373_P002	Maize	cytosol, plasma membrane	86.07	88.73
HORVU4Hr1G006300.1	Barley	cytosol	82.19	83.96
Zm00001d034075_P001	Maize	cytosol	5.29	83.33
GSMUA_Achr3P29770_001	Banana	cytosol, plasma membrane	79.01	81.9
VIT_13s0064g00810.t01	Wine grape	cytosol	71.96	80.0
CDX93902	Canola	cytosol	73.02	78.86
CDY53711	Canola	cytosol	72.49	78.29
AT3G63520.1	Thale cress	cytosol	74.07	78.07
VIT_13s0064g00840.t01	Wine grape	extracellular	74.78	77.66
Solyc01g087250.2.1	Tomato	cytosol, plastid	74.25	77.25
Solyc01g087260.2.1	Tomato	plastid	71.6	74.5
CDY34746	Canola	cytosol	16.58	73.44
KRH27468	Soybean	endoplasmic reticulum, mitochondrion	69.84	73.33
CDY34748	Canola	endoplasmic reticulum, extracellular	62.26	73.08
KRH20815	Soybean	cytosol, endoplasmic reticulum, extracellular	72.13	71.25
Bra040449.1-P	Field mustard	cytosol	68.25	70.75
Bra007826.1-P	Field mustard	plastid	67.37	63.77
CDX76782	Canola	mitochondrion	67.72	62.75
CDX76783	Canola	plastid	66.84	62.03
Bra007825.1-P	Field mustard	plastid	58.55	57.74
CDY34747	Canola	cytosol	13.23	55.56
HORVU5Hr1G054970.1	Barley	cytosol	35.45	33.06
HORVU5Hr1G008050.1	Barley	plastid	34.39	32.13
HORVU5Hr1G092850.2	Barley	plastid	35.8	31.52
HORVU5Hr1G044510.1	Barley	cytosol	33.33	31.5
HORVU6Hr1G068720.1	Barley	plastid	33.51	29.55
HORVU1Hr1G000550.2	Barley	cytosol	26.45	25.6
HORVU3Hr1G108100.2	Barley	plasma membrane, plastid	26.45	25.17
HORVU5Hr1G055740.1	Barley	plasma membrane	27.34	24.11

Protein Annotations

EnsemblPlants:HORVU5Hr1G000320.9	EnsemblPlantsGene:HORVU5Hr1G000320	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114	InterPro:Carotenoid_Oase	PANTHER:PTHR10543
PANTHER:PTHR10543:SF37	PFAM:PF03055	UniParc:UPI000B4665A4	UniProt:A0A287Q5J2	MapMan:9.1.6.3.1	:

Description

No Description!

Coordinates

chrchr5H:+:1314189..1319474

Molecular Weight (calculated)

64026.9 Da

IEP (calculated)

6.765

GRAVY (calculated)

-0.276

Length

567 amino acids

Sequence
(BLAST)

001: MAGSAVATTI VVLRPSGWLQ TKPWPSQSPR NKALSIFFFF HQPSKGVASW AVDLLERIAV RLGHDKAKPL HWLSGNFAPV RDETPPAAGL PVRGHLPECL
101: NGEFVRVGPN PKFVPVAGYH WFDGDGMIHA MRIKDGKATY VSRYVKTSRL KQEEYFGGAK FMKIGDLKGF FGLFMVQMQA LRKKLKILDV TYGFGTANTA
201: LIYHHGKLMA LSEADKPYVV KVLEDGDLQT LGLLDYDKRL KHSFTAHPKV DPFTDEMFTF GYSHEPPYCT YRVITKDGVM LDPVPITIPE SVMMHDFAIT
301: ENYSIFMDLP LLFRPKEMVK NGEFIYKFDP TKKARFGILQ RYEKDEKTIR WFELPNCFIF HNANAWEEGD EVVLITCRLE NPDLDKVNGT QNEKLENFGN
401: ELYEMRFNMK TGAASQKQLS VAAVDFPRIN ESYTGRKQRY VYCTILDSIA KVTGIIKFDL HAEPESGKKQ LEVGGNVTGI YDLGPGRFGS EAVFVPKEPG
501: VSGEEDDGYL IFFVHDENTG KSEVNVIDAK TMSADPVAVV ELPNRVPYGF HAFFVNEEQL VHQQAEV

Best Arabidopsis Sequence Match ( AT3G63520.1 )
(BLAST)

001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI

Arabidopsis Description

CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.