Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G277600.3 | Wheat | nucleus | 74.63 | 75.64 |
| TraesCS5B01G270000.2 | Wheat | golgi | 69.06 | 67.69 |
| HORVU5Hr1G073990.1 | Barley | mitochondrion | 43.14 | 58.45 |
| Zm00001d015046_P002 | Maize | cytosol, extracellular, mitochondrion, nucleus | 6.27 | 40.0 |
| Zm00001d027914_P001 | Maize | nucleus | 5.44 | 31.71 |
| Zm00001d020965_P005 | Maize | nucleus | 28.36 | 30.28 |
| KRH66595 | Soybean | nucleus | 2.51 | 29.27 |
| Zm00001d021166_P001 | Maize | cytosol | 6.41 | 26.98 |
| OQU89707 | Sorghum | nucleus | 28.5 | 26.85 |
| Zm00001d006041_P002 | Maize | nucleus | 27.25 | 24.78 |
| TraesCS5A01G186800.1 | Wheat | nucleus | 9.9 | 22.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.19 | 20.8 |
| AT1G20970.1 | Thale cress | nucleus | 18.05 | 18.99 |
| GSMUA_Achr7P20610_001 | Banana | nucleus | 17.98 | 18.57 |
| KRH49503 | Soybean | endoplasmic reticulum | 16.31 | 18.06 |
| CDY29491 | Canola | nucleus | 17.35 | 18.04 |
| VIT_18s0122g00410.t01 | Wine grape | nucleus | 18.54 | 18.01 |
| CDY04588 | Canola | nucleus | 17.07 | 17.91 |
| Bra025862.1-P | Field mustard | nucleus | 17.21 | 17.62 |
| KRH00096 | Soybean | nucleus | 4.95 | 16.82 |
| KRG89178 | Soybean | endoplasmic reticulum, nucleus | 17.28 | 16.52 |
| Solyc05g008780.2.1 | Tomato | nucleus | 16.17 | 15.05 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G269500.1 | EnsemblPlantsGene:TraesCS5A01G269500 | ncoils:Coil | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF6 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:480283748..480289174
Molecular Weight (calculated)
153756.0 Da
IEP (calculated)
4.309
GRAVY (calculated)
-0.745
Length
1435 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTAEGTARGG AGEAPKAELA AAKAVSPTGE EREGVGGPFV IVNGDSDGHS DPGSDTGAGA EPDSRREEED LPRANAAPAA DAGGDHPSAG GELAALDGAV
0101: GLPSSNGHAS PATVESEVDG VGEVEGEGSH NSEAVLGDQG TAAAGELDGR DAATELKIDH ADAADDSAPP AVESVLNVKD GESEKSAATE VVAPEEQQDG
0201: EKNAPAESSG SDNPPTHVES GTIVSESEGS GEQSKGEEIA AEIMEPGTNG SGISGVTEQH DADTSVTSTD PVIHVDEGKH EHSAVTELVE QDGSNGHDHV
0301: GQIADSGTSA PEIEADGSKG QQVEALTAEP EVLDGGDCEA TSKVPSEEEV VANGLGCAKD TADTSLELEG ESEVPSGVVE VDEVVGKDGE GDLHDGHTVV
0401: VPSSDEEAKP PAKEGTNEAI PAEVVKEGIS EQIVQDNESV KDDVSSVTLQ SVNSEDPVVE PKGDHILQVE DAAGDGNMAV SDVKAVMLEM NTADSVQTQD
0501: LKSASEDRSV PLHVNSSDQV EEEVNKEVSP EDAHLAHNDY SSEQTGKHEQ LELPGTGAAA AVKSDNAVIE AEPGKEMEVV EDVVLHAAAA STFHNEPRSI
0601: DFTDNDYVKP DTELESCDHV QAEECNSDEI SSTTVNEVIS GVSMEHETAV TDDAELRYDT GDASLSETAV DEGEAVASTD NKASVVDEVT PSSATGSESD
0701: VAGEAGDVSQ VGESCDLVTD CQSNNDQPDI LDASTTREEL VSLTEYPCLP VVTSESGVKA PHTDKATGTS DETSKDTENI NACNISSTEV ETKSLEVVEP
0801: SSVDGVVPVE HENDDEHAHK GKEKIAEDSS ESPVEQPVEL ESDKGNIQLM KPHKFFIVKV PKLAGDDVWA RVQDAQVHLD RLTQERDAIN ARKKKQKAAF
0901: DEYREKLETA RKEENEARVA HAGKRNVLDG VRSTIGKLNQ ATSVEEIDEL IVRKQRTMEH ETISLKEEKL FIKEINELKA QRKQACSNMG SEAEMSEAFH
1001: QKDHIHEQHK NLKKEADLLF KNLKSLEENR KKIQKSFEDE RAALRKLNDD LYAANEQRQQ AYENWVELRG EPGKKNKYFF MYKKDRDAAG KLLSSGDMDG
1101: LQSYCNNQVE GFMEMWNKDD DFRRLYVEAN QISTLRRLGT HDGRSLGPDE EPPVIPSNNY SRRPNNPSQL TVSSPNVPIT TSEAAPEKST AVVVPVEEDS
1201: FPVLPPTQTH KQAKPKAAGS GSTQKEITPA PAPAPAPEVV DVKQIEKEKA RLAEELELAR KAEELARKEE ELRAQRAAAE KERLRLEQIA KAKEAEERKK
1301: KKAEKAQERA EFKARKEAEM KEKKKAKKSK KVGTTPAALT SGESNSAPIA PADTESNTTD NTRNVDVPQP QPIIIKRIPK PIVRQLQPMP APLRNKFKRR
1401: TRQYIFIGVA VALAVVALIL AGRTLDLPGL SSIRF
0101: GLPSSNGHAS PATVESEVDG VGEVEGEGSH NSEAVLGDQG TAAAGELDGR DAATELKIDH ADAADDSAPP AVESVLNVKD GESEKSAATE VVAPEEQQDG
0201: EKNAPAESSG SDNPPTHVES GTIVSESEGS GEQSKGEEIA AEIMEPGTNG SGISGVTEQH DADTSVTSTD PVIHVDEGKH EHSAVTELVE QDGSNGHDHV
0301: GQIADSGTSA PEIEADGSKG QQVEALTAEP EVLDGGDCEA TSKVPSEEEV VANGLGCAKD TADTSLELEG ESEVPSGVVE VDEVVGKDGE GDLHDGHTVV
0401: VPSSDEEAKP PAKEGTNEAI PAEVVKEGIS EQIVQDNESV KDDVSSVTLQ SVNSEDPVVE PKGDHILQVE DAAGDGNMAV SDVKAVMLEM NTADSVQTQD
0501: LKSASEDRSV PLHVNSSDQV EEEVNKEVSP EDAHLAHNDY SSEQTGKHEQ LELPGTGAAA AVKSDNAVIE AEPGKEMEVV EDVVLHAAAA STFHNEPRSI
0601: DFTDNDYVKP DTELESCDHV QAEECNSDEI SSTTVNEVIS GVSMEHETAV TDDAELRYDT GDASLSETAV DEGEAVASTD NKASVVDEVT PSSATGSESD
0701: VAGEAGDVSQ VGESCDLVTD CQSNNDQPDI LDASTTREEL VSLTEYPCLP VVTSESGVKA PHTDKATGTS DETSKDTENI NACNISSTEV ETKSLEVVEP
0801: SSVDGVVPVE HENDDEHAHK GKEKIAEDSS ESPVEQPVEL ESDKGNIQLM KPHKFFIVKV PKLAGDDVWA RVQDAQVHLD RLTQERDAIN ARKKKQKAAF
0901: DEYREKLETA RKEENEARVA HAGKRNVLDG VRSTIGKLNQ ATSVEEIDEL IVRKQRTMEH ETISLKEEKL FIKEINELKA QRKQACSNMG SEAEMSEAFH
1001: QKDHIHEQHK NLKKEADLLF KNLKSLEENR KKIQKSFEDE RAALRKLNDD LYAANEQRQQ AYENWVELRG EPGKKNKYFF MYKKDRDAAG KLLSSGDMDG
1101: LQSYCNNQVE GFMEMWNKDD DFRRLYVEAN QISTLRRLGT HDGRSLGPDE EPPVIPSNNY SRRPNNPSQL TVSSPNVPIT TSEAAPEKST AVVVPVEEDS
1201: FPVLPPTQTH KQAKPKAAGS GSTQKEITPA PAPAPAPEVV DVKQIEKEKA RLAEELELAR KAEELARKEE ELRAQRAAAE KERLRLEQIA KAKEAEERKK
1301: KKAEKAQERA EFKARKEAEM KEKKKAKKSK KVGTTPAALT SGESNSAPIA PADTESNTTD NTRNVDVPQP QPIIIKRIPK PIVRQLQPMP APLRNKFKRR
1401: TRQYIFIGVA VALAVVALIL AGRTLDLPGL SSIRF
0001: MPVEVERDQG EVSVKVDFEN ATEIKPEVVV SATKEDVVNG ISHGGSNNGN GNDTDGSYDF ITENDTVGDD FVESDYVKPV DDANVEKDLK EGENVKVDAP
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1) /.../30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G20970]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.