Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G277600.3 | Wheat | nucleus | 77.87 | 80.51 |
| TraesCS5A01G269500.1 | Wheat | golgi | 67.69 | 69.06 |
| HORVU5Hr1G073990.1 | Barley | mitochondrion | 41.87 | 57.88 |
| Zm00001d015046_P002 | Maize | cytosol, extracellular, mitochondrion, nucleus | 6.28 | 40.89 |
| Zm00001d027914_P001 | Maize | nucleus | 5.46 | 32.52 |
| Zm00001d020965_P005 | Maize | nucleus | 27.32 | 29.76 |
| KRH66595 | Soybean | nucleus | 2.46 | 29.27 |
| Zm00001d021166_P001 | Maize | cytosol | 6.28 | 26.98 |
| OQU89707 | Sorghum | nucleus | 27.66 | 26.59 |
| Zm00001d006041_P002 | Maize | nucleus | 26.91 | 24.97 |
| TraesCS5B01G185200.2 | Wheat | nucleus | 9.9 | 23.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.83 | 20.8 |
| GSMUA_Achr7P20610_001 | Banana | nucleus | 17.96 | 18.93 |
| VIT_18s0122g00410.t01 | Wine grape | nucleus | 18.78 | 18.62 |
| AT1G20970.1 | Thale cress | nucleus | 17.21 | 18.48 |
| KRH49503 | Soybean | endoplasmic reticulum | 16.05 | 18.13 |
| CDY29491 | Canola | nucleus | 16.39 | 17.39 |
| CDY04588 | Canola | nucleus | 16.19 | 17.32 |
| KRG89178 | Soybean | endoplasmic reticulum, nucleus | 17.49 | 17.06 |
| Bra025862.1-P | Field mustard | nucleus | 16.26 | 16.98 |
| KRH00096 | Soybean | nucleus | 4.85 | 16.82 |
| Solyc05g008780.2.1 | Tomato | nucleus | 16.8 | 15.95 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G270000.2 | EnsemblPlantsGene:TraesCS5B01G270000 | ncoils:Coil | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF6 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:455733295..455738893
Molecular Weight (calculated)
156263.0 Da
IEP (calculated)
4.289
GRAVY (calculated)
-0.747
Length
1464 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTAEGTARGG AGEAPKAELA AAKAVSPTGE EREGVGGPFV IVNGDSDGHS DPGSDTGAGA ESDSRPEEED LPRANAAPAA DAGGDYPTAG GELAAPDGAV
0101: GLPSSNGHAS PAPAESEVDG VGEVEGEGSH NSEAGPGDQG TAAAGELDGQ DAATELKIDH ADAADDSAPH AVESVLNVND GESEKSAATE VVAPEEQQDG
0201: EKNAPAESSG SDKPPTQAES GSIVLESEGS GEQSKGEEIA AEIMESGTDG SGVSGVTGQH DADTSVTATD PVINVDEGKH EHAAVTELVE QDGSNGHDHV
0301: EQIADSGTSA PEIEADGSKG QQIEALTTEP EVLDGGDCEA TSKGPSEEEV VANGPGCAKD TSQPEVLDGG DCEATSKGPS EEEVVANGLG CAKDTADTSL
0401: ELEGESEVAS VVVEVEGVVV KDGEGDLHDG HTVVVPSSDE EAKPPAKEGT NEAIPAEVVK EGISEQIVQD NESVKVDVSS VTHQSVNSEA PVVEPKGDHI
0501: LQVEDAAGDG NTAVSDVKVV MLEMNAADSV QTPDLKSASE DRSVPLHANS SDQVEEEVNK EVSPEDAHLA QNEYSSVQTG KHEQLELPGT GAAAADKSDN
0601: AVVEAEPGKE MEVVEDVALH AAAASTFHNE PRSIDFIDNN YVKPDTELES CDHVQAEECN SDEISSTAVD EVISGVSTEH GTAVTDDAEL RYDTGGASLS
0701: ETAVDQGEAV ALTDNKASVV DEVKPSSAPG SESDVAPEAG DVSQIGESRD LVTDCQSNND QPDILDTSTT REELVSLTEY PCLPVVTLES GVKAPHTDKA
0801: TATSDETSKD TENINACNIS STEVETKSLE VVEPSSVDGV VPVEHENDDE HEHKGKEKIA EDSSESPVEQ PVDLESDKGN IQLMRPHKFF IVKVPKLAGD
0901: DVWAKVQDAQ VHLDRLTQER DAINARKKKQ KAAFDEYREK LEAARKEETE ARAAHAGKRN VLDGVRSTIG KLNQATSVEE IDELIVRKQR TMEHETISLK
1001: EEKLFIKEIN DLKAQRKQAC SNMGSEAEMS EAFHQKDHIH EQHKTLKKEA DLLFKNLKSL EENRKKIQKS FEDERAALRK LNDDLYAANE LRQQAYEKWV
1101: ELRGEPGKKN KYFFMYKKDR DAVGKLLSSG DIDGLQSYCN NQVEGFMEMW NKDDDFRRLY VEANQISTLR RLATHDGRSL GPDEEPPVIP SNNYSRRPNN
1201: PSQLTVSSPN VPITTKEAAP EKSTAVVVPV EEDSFPVLPP TQTHKQAKPK AAGSGSSQKE ITPAPAPAPE VVDVKQIEKE KARLAEEMEL ARKAEELARK
1301: EEELREQRAA AEKEQLRLEQ IAKAKEAEER KKKKAEKAQE RAEFKARKEA EMKEKKKAKK SKKVGTAPAD LASVQSNPAP IATTDAESNT PDNTRDVDVP
1401: QQPPRRPGKP AVRQLQPMPA PLRNKFKRRT RQYIFIGVAV ALAVVALILA GRTLDLPGLS SLRF
0101: GLPSSNGHAS PAPAESEVDG VGEVEGEGSH NSEAGPGDQG TAAAGELDGQ DAATELKIDH ADAADDSAPH AVESVLNVND GESEKSAATE VVAPEEQQDG
0201: EKNAPAESSG SDKPPTQAES GSIVLESEGS GEQSKGEEIA AEIMESGTDG SGVSGVTGQH DADTSVTATD PVINVDEGKH EHAAVTELVE QDGSNGHDHV
0301: EQIADSGTSA PEIEADGSKG QQIEALTTEP EVLDGGDCEA TSKGPSEEEV VANGPGCAKD TSQPEVLDGG DCEATSKGPS EEEVVANGLG CAKDTADTSL
0401: ELEGESEVAS VVVEVEGVVV KDGEGDLHDG HTVVVPSSDE EAKPPAKEGT NEAIPAEVVK EGISEQIVQD NESVKVDVSS VTHQSVNSEA PVVEPKGDHI
0501: LQVEDAAGDG NTAVSDVKVV MLEMNAADSV QTPDLKSASE DRSVPLHANS SDQVEEEVNK EVSPEDAHLA QNEYSSVQTG KHEQLELPGT GAAAADKSDN
0601: AVVEAEPGKE MEVVEDVALH AAAASTFHNE PRSIDFIDNN YVKPDTELES CDHVQAEECN SDEISSTAVD EVISGVSTEH GTAVTDDAEL RYDTGGASLS
0701: ETAVDQGEAV ALTDNKASVV DEVKPSSAPG SESDVAPEAG DVSQIGESRD LVTDCQSNND QPDILDTSTT REELVSLTEY PCLPVVTLES GVKAPHTDKA
0801: TATSDETSKD TENINACNIS STEVETKSLE VVEPSSVDGV VPVEHENDDE HEHKGKEKIA EDSSESPVEQ PVDLESDKGN IQLMRPHKFF IVKVPKLAGD
0901: DVWAKVQDAQ VHLDRLTQER DAINARKKKQ KAAFDEYREK LEAARKEETE ARAAHAGKRN VLDGVRSTIG KLNQATSVEE IDELIVRKQR TMEHETISLK
1001: EEKLFIKEIN DLKAQRKQAC SNMGSEAEMS EAFHQKDHIH EQHKTLKKEA DLLFKNLKSL EENRKKIQKS FEDERAALRK LNDDLYAANE LRQQAYEKWV
1101: ELRGEPGKKN KYFFMYKKDR DAVGKLLSSG DIDGLQSYCN NQVEGFMEMW NKDDDFRRLY VEANQISTLR RLATHDGRSL GPDEEPPVIP SNNYSRRPNN
1201: PSQLTVSSPN VPITTKEAAP EKSTAVVVPV EEDSFPVLPP TQTHKQAKPK AAGSGSSQKE ITPAPAPAPE VVDVKQIEKE KARLAEEMEL ARKAEELARK
1301: EEELREQRAA AEKEQLRLEQ IAKAKEAEER KKKKAEKAQE RAEFKARKEA EMKEKKKAKK SKKVGTAPAD LASVQSNPAP IATTDAESNT PDNTRDVDVP
1401: QQPPRRPGKP AVRQLQPMPA PLRNKFKRRT RQYIFIGVAV ALAVVALILA GRTLDLPGLS SLRF
0001: MPVEVERDQG EVSVKVDFEN ATEIKPEVVV SATKEDVVNG ISHGGSNNGN GNDTDGSYDF ITENDTVGDD FVESDYVKPV DDANVEKDLK EGENVKVDAP
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1) /.../30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G20970]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.