Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
endoplasmic reticulum: 28499913 mitochondrion: 28499913 nucleus: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66595 | Soybean | nucleus | 7.26 | 88.62 |
| KRH49503 | Soybean | endoplasmic reticulum | 46.57 | 53.94 |
| KRH00096 | Soybean | nucleus | 14.06 | 50.0 |
| AT1G20970.1 | Thale cress | nucleus | 23.58 | 25.95 |
| KRH27251 | Soybean | endoplasmic reticulum, nucleus | 10.33 | 25.66 |
| VIT_18s0122g00410.t01 | Wine grape | nucleus | 25.25 | 25.66 |
| CDY29491 | Canola | nucleus | 22.58 | 24.57 |
| CDY04588 | Canola | nucleus | 22.25 | 24.42 |
| KRH22077 | Soybean | endoplasmic reticulum | 9.93 | 24.19 |
| Bra025862.1-P | Field mustard | nucleus | 22.58 | 24.18 |
| Zm00001d015046_P002 | Maize | cytosol, extracellular, mitochondrion, nucleus | 3.4 | 22.67 |
| GSMUA_Achr7P20610_001 | Banana | nucleus | 19.92 | 21.53 |
| HORVU5Hr1G073990.1 | Barley | mitochondrion | 14.86 | 21.06 |
| Zm00001d027914_P001 | Maize | nucleus | 3.4 | 20.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.26 | 20.64 |
| KRH55252 | Soybean | nucleus | 9.13 | 20.6 |
| Solyc05g008780.2.1 | Tomato | nucleus | 20.99 | 20.43 |
| Zm00001d021166_P001 | Maize | cytosol | 4.2 | 18.48 |
| TraesCS5D01G277600.3 | Wheat | nucleus | 17.19 | 18.22 |
| OQU89707 | Sorghum | nucleus | 18.12 | 17.86 |
| Zm00001d020965_P005 | Maize | nucleus | 15.86 | 17.71 |
| TraesCS5B01G270000.2 | Wheat | golgi | 17.06 | 17.49 |
| TraesCS5A01G269500.1 | Wheat | golgi | 16.52 | 17.28 |
| Zm00001d006041_P002 | Maize | nucleus | 17.06 | 16.22 |
Protein Annotations
| EMBL:ACUP02012190 | EnsemblPlants:KRG89178 | EnsemblPlantsGene:GLYMA_20G006500 | EntrezGene:100798700 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF6 | ProteinID:KRG89178 | ProteinID:KRG89178.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000233D962 | UniProt:I1ND04 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr20:-:631116..636930
Molecular Weight (calculated)
161191.0 Da
IEP (calculated)
4.162
GRAVY (calculated)
-0.836
Length
1501 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTEEQVVNVR GEVSDSVTDH RSVKANGVAH GVGGDLDLAA DNNGAALSEK ICKDAVSNGT AEEVSETAMV NVVSRDDELK CADGQNDTGS VQNGVVENDD
0101: KSANAVAEEL VTDHDEYVVV GDSDVQNGDD VNANANGVEE CEMLDGAEGS GDENGVVVSA VEGDADVNHS DREFECVDVH NDVAVETVEE EVTATTDQNV
0201: GNGNDVQGRS ESVSDEDVDK SGESVNVVSA DVLDEKDIVT DGDHDAEEVL EKNEILVDAD GVSATTDLKQ CEPEDARNSS EKGQVESVSG LAKPEPSECT
0301: EENEIAVEGE PGSKLERSEE EAGSEIVPQG ENLTALNSTD VTGDGDVVSD IAVESKDEPS VDVCELKSIA VENDVDVQEL KNGAVQSEIV SEMKNNTEES
0401: VAEPSNGAVE SEAEPSNGAV ESEADPSNGA VEWETEHSNG AVERETEHSN GAVESVAEPS NGAVESVAEP SNSAVDREDE PSNGAVDKEA EPSNGAVDKE
0501: AEPSNGAVDK EAEPSNGTVE REAEPSNGAV QSEAEPSNGA VGSVAEPSNG AVGSVAEPSN VAVESETDPS NGALESETDP SNGAVESEAE PSNGAVESVA
0601: ELSNGAIESV AKLSNSAVDS EAEPSNGAVD SEAEPSNGAV DKEAEPSKGT VESEAGPSNG AVESEAEPSN GAVESEAEPS NGAVRCVAEP SNGAVESEAE
0701: PSNGAVAREA KPSNGAVESE AEPSQGAVDS EAEPSNGAVE SEVKPSQGAV ESEAEPSQDA VESEAELSNG AVNREAETAS GAVESEAKTS SGAVETEVKP
0801: SHGVVESEAK PSNGVAESES EPSVDVCETK NDVVNSEAET SSGALQSERE ACVVSEMKNN AVESEAQPSV DVSEKKTNAV DSEAELSVKG GLSVESEGSN
0901: QGDEDSRPAS DALDGQNVGT EVVKKPFYYL IRVPRYDDDE NIKEKIKNAL HQVEEKTKIR DAIRIESQTI KASCKDFDQE FRAAIAAHRA ARDLLKSKRQ
1001: EIDSVQSTMN RLNNAISVGD IDDKIRSMEH MIQHETLPLN KEKQLIREIK QLKQNREELS SNMKKQDQSQ QSVDNKDDNI EEHFKHLQLL KKEMEVLRNN
1101: VLKSDTETKA AKKKYNDECD KLNELLARFR AADDSRQEAY AKLLALKKQL HEKSKNFWEY RDAANKAQEL AAGGKKEELQ CFCVDQVERI MELWNKNDGF
1201: RRDYVRCNTR STLRRLQTLD GRSLGPDEEP PVIPNVITER ASKNIPMVLQ STLEQEKKST PTESVNVKDE PVSKVVVQRT ETSQTTKAKK PTKPAPLEKH
1301: VARWGDESDE DEVKKEEPVR TKEEEELILK AEKARMEEEE AKLKEKRRLE EIEKAKEALL RKKRNAEKAQ QRAALKAQKE AELKEKEREK RAKKKERRKA
1401: GSAVTAENTE QESAPIPETL TRSVEEFEQT EKTAEVTKKP QKTSQFTRQT KVKSVPAALR NRGKRRIQPW VCVLIALVVA VALFYVGHNC SLRSSLEGFG
1501: Y
0101: KSANAVAEEL VTDHDEYVVV GDSDVQNGDD VNANANGVEE CEMLDGAEGS GDENGVVVSA VEGDADVNHS DREFECVDVH NDVAVETVEE EVTATTDQNV
0201: GNGNDVQGRS ESVSDEDVDK SGESVNVVSA DVLDEKDIVT DGDHDAEEVL EKNEILVDAD GVSATTDLKQ CEPEDARNSS EKGQVESVSG LAKPEPSECT
0301: EENEIAVEGE PGSKLERSEE EAGSEIVPQG ENLTALNSTD VTGDGDVVSD IAVESKDEPS VDVCELKSIA VENDVDVQEL KNGAVQSEIV SEMKNNTEES
0401: VAEPSNGAVE SEAEPSNGAV ESEADPSNGA VEWETEHSNG AVERETEHSN GAVESVAEPS NGAVESVAEP SNSAVDREDE PSNGAVDKEA EPSNGAVDKE
0501: AEPSNGAVDK EAEPSNGTVE REAEPSNGAV QSEAEPSNGA VGSVAEPSNG AVGSVAEPSN VAVESETDPS NGALESETDP SNGAVESEAE PSNGAVESVA
0601: ELSNGAIESV AKLSNSAVDS EAEPSNGAVD SEAEPSNGAV DKEAEPSKGT VESEAGPSNG AVESEAEPSN GAVESEAEPS NGAVRCVAEP SNGAVESEAE
0701: PSNGAVAREA KPSNGAVESE AEPSQGAVDS EAEPSNGAVE SEVKPSQGAV ESEAEPSQDA VESEAELSNG AVNREAETAS GAVESEAKTS SGAVETEVKP
0801: SHGVVESEAK PSNGVAESES EPSVDVCETK NDVVNSEAET SSGALQSERE ACVVSEMKNN AVESEAQPSV DVSEKKTNAV DSEAELSVKG GLSVESEGSN
0901: QGDEDSRPAS DALDGQNVGT EVVKKPFYYL IRVPRYDDDE NIKEKIKNAL HQVEEKTKIR DAIRIESQTI KASCKDFDQE FRAAIAAHRA ARDLLKSKRQ
1001: EIDSVQSTMN RLNNAISVGD IDDKIRSMEH MIQHETLPLN KEKQLIREIK QLKQNREELS SNMKKQDQSQ QSVDNKDDNI EEHFKHLQLL KKEMEVLRNN
1101: VLKSDTETKA AKKKYNDECD KLNELLARFR AADDSRQEAY AKLLALKKQL HEKSKNFWEY RDAANKAQEL AAGGKKEELQ CFCVDQVERI MELWNKNDGF
1201: RRDYVRCNTR STLRRLQTLD GRSLGPDEEP PVIPNVITER ASKNIPMVLQ STLEQEKKST PTESVNVKDE PVSKVVVQRT ETSQTTKAKK PTKPAPLEKH
1301: VARWGDESDE DEVKKEEPVR TKEEEELILK AEKARMEEEE AKLKEKRRLE EIEKAKEALL RKKRNAEKAQ QRAALKAQKE AELKEKEREK RAKKKERRKA
1401: GSAVTAENTE QESAPIPETL TRSVEEFEQT EKTAEVTKKP QKTSQFTRQT KVKSVPAALR NRGKRRIQPW VCVLIALVVA VALFYVGHNC SLRSSLEGFG
1501: Y
0001: MPVEVERDQG EVSVKVDFEN ATEIKPEVVV SATKEDVVNG ISHGGSNNGN GNDTDGSYDF ITENDTVGDD FVESDYVKPV DDANVEKDLK EGENVKVDAP
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1) /.../30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G20970]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.