Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
endoplasmic reticulum: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66595 | Soybean | nucleus | 8.26 | 86.99 |
| KRH00096 | Soybean | nucleus | 17.9 | 54.98 |
| KRG89178 | Soybean | endoplasmic reticulum, nucleus | 53.94 | 46.57 |
| VIT_18s0122g00410.t01 | Wine grape | nucleus | 29.32 | 25.73 |
| KRH27251 | Soybean | endoplasmic reticulum, nucleus | 11.65 | 25.0 |
| KRH22077 | Soybean | endoplasmic reticulum | 11.5 | 24.19 |
| AT1G20970.1 | Thale cress | nucleus | 24.31 | 23.09 |
| CDY29491 | Canola | nucleus | 24.23 | 22.75 |
| CDY04588 | Canola | nucleus | 23.77 | 22.51 |
| Bra025862.1-P | Field mustard | nucleus | 24.23 | 22.4 |
| KRH55252 | Soybean | nucleus | 10.88 | 21.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.06 | 20.72 |
| HORVU5Hr1G073990.1 | Barley | mitochondrion | 16.36 | 20.02 |
| Zm00001d015046_P002 | Maize | cytosol, extracellular, mitochondrion, nucleus | 3.47 | 20.0 |
| Zm00001d027914_P001 | Maize | nucleus | 3.78 | 19.92 |
| Solyc05g008780.2.1 | Tomato | nucleus | 23.69 | 19.91 |
| GSMUA_Achr7P20610_001 | Banana | nucleus | 20.91 | 19.51 |
| TraesCS5D01G277600.3 | Wheat | nucleus | 18.98 | 17.37 |
| OQU89707 | Sorghum | nucleus | 19.68 | 16.74 |
| TraesCS5A01G269500.1 | Wheat | golgi | 18.06 | 16.31 |
| Zm00001d020965_P005 | Maize | nucleus | 16.74 | 16.15 |
| Zm00001d021166_P001 | Maize | cytosol | 4.24 | 16.13 |
| TraesCS5B01G270000.2 | Wheat | golgi | 18.13 | 16.05 |
| Zm00001d006041_P002 | Maize | nucleus | 17.13 | 14.07 |
Protein Annotations
| EMBL:ACUP02004384 | EnsemblPlants:KRH49503 | EnsemblPlantsGene:GLYMA_07G159600 | EntrezGene:100820077 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF6 | ProteinID:KRH49503 | ProteinID:KRH49503.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002338ADA | UniProt:I1KKN0 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr7:-:20280035..20285876
Molecular Weight (calculated)
140829.0 Da
IEP (calculated)
4.197
GRAVY (calculated)
-0.913
Length
1296 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTEEQVVNVR GEESDSGNDH GSVKANGVAH GVGGDSDLAA DNNGAASSGK NCNDAVSNGT AEEGTETATV DVVSREDELK SADSQNGMGS VQNGVVDNDD
0101: KSANAVAEEL VTDHEEYVVV GDSDVQNGDD VTANGVEECE MLDGAEASGD ENGVVVEGEE DVCQSDREFE CVDVHDDVTA TTDENGGNGN DVQGRSESVS
0201: DKDVNKRGES ENVVSADVSD EKDIVTDGDH DVEEVVEKNE VPVVVDGGSA STDVKECEPE DAQNSLEKGQ VESVSGLAEP VLEPSECTEE NEIAVEGEPG
0301: SKLERSEEEA GSEIVPEGEI LTALSCTDVS DIAVESDGEP SVDVCVMKSN AVESDVDVHE LKNSAVDSES EPSNGAVQSE IVSEMKNNTE EREAEPSNGA
0401: VDCEAELPNG AVESEAEPST SAVESEAEPS NGVVERETKP SSGAVERETE PSNGAVESVA EPSNGAIDSE AEPSNGTVER EAAPSNGAVE REAAPSNGVV
0501: EREAVPSNGA VESEVEPSNG AVDSEAESSN VAVESEAESS NVAVESEAES SNGAVESVAE PSNDAVESGA EPSQGAVESE AEPSNGAVES EADPSNGVAE
0601: SENEPSVDVC ETKNDAVNSE AETSSGGLQS EKEASVVSEM KNNAVESEAE HSKGAVECEA QPFVDVSQKK TDTIEGEAEL SVKGGLSVEG EGSNQGDEDS
0701: RPASDALDGQ NVGAEVVEKP FYYLIRVPRY DDDGNMKEKI RNALHQVEEK SKIRDAIRAE SQTIKASCKD FDQEFRAAIA AHRAARDLLK SKRQEMDSVQ
0801: STMNRLNNAI SVGDIDGKIR SMEHMIEHET LPLNKEKQLI REIKQLKQNR EELSSNMKRQ DQSQQSLENK DDNIEEHFKH LQLLKKEMEV LRNNVLKSDA
0901: ETKAAKKKYN DECDKLNELL ARFRAADDTR QEAYAKLLAL KKQLHEKSKN FWEYRDAATK AQELAAGGKK EELQCFCVDE VERIMELWNK NDEFRRDYVR
1001: CNTRSTLRRL QTLDGRSLGP DEEPLVMPNA ITERASKNIP MVSNTTMEQE KKSPRESVNV KDEPDSKVVA QRTETSQTTK AKKPTKPAPL EKHVARWGDE
1101: SDEDEDKDKN EEEPVRTKEE EELILKAEKA RKEEEEAKLK EKRRLEEIEK AKEALQRKKR NAEKAQQRAA LKAQKEAELK EKEREKRAKK KERRKTSSAV
1201: TAENTEQESA HTTETLTSVE ESDLTEKPAE VTKKPQKPSQ FTRQTKVKSV PAALRNRAKR RIQPWMWVLI AVVVVVALFY VGNSSSLRSS LEGFGY
0101: KSANAVAEEL VTDHEEYVVV GDSDVQNGDD VTANGVEECE MLDGAEASGD ENGVVVEGEE DVCQSDREFE CVDVHDDVTA TTDENGGNGN DVQGRSESVS
0201: DKDVNKRGES ENVVSADVSD EKDIVTDGDH DVEEVVEKNE VPVVVDGGSA STDVKECEPE DAQNSLEKGQ VESVSGLAEP VLEPSECTEE NEIAVEGEPG
0301: SKLERSEEEA GSEIVPEGEI LTALSCTDVS DIAVESDGEP SVDVCVMKSN AVESDVDVHE LKNSAVDSES EPSNGAVQSE IVSEMKNNTE EREAEPSNGA
0401: VDCEAELPNG AVESEAEPST SAVESEAEPS NGVVERETKP SSGAVERETE PSNGAVESVA EPSNGAIDSE AEPSNGTVER EAAPSNGAVE REAAPSNGVV
0501: EREAVPSNGA VESEVEPSNG AVDSEAESSN VAVESEAESS NVAVESEAES SNGAVESVAE PSNDAVESGA EPSQGAVESE AEPSNGAVES EADPSNGVAE
0601: SENEPSVDVC ETKNDAVNSE AETSSGGLQS EKEASVVSEM KNNAVESEAE HSKGAVECEA QPFVDVSQKK TDTIEGEAEL SVKGGLSVEG EGSNQGDEDS
0701: RPASDALDGQ NVGAEVVEKP FYYLIRVPRY DDDGNMKEKI RNALHQVEEK SKIRDAIRAE SQTIKASCKD FDQEFRAAIA AHRAARDLLK SKRQEMDSVQ
0801: STMNRLNNAI SVGDIDGKIR SMEHMIEHET LPLNKEKQLI REIKQLKQNR EELSSNMKRQ DQSQQSLENK DDNIEEHFKH LQLLKKEMEV LRNNVLKSDA
0901: ETKAAKKKYN DECDKLNELL ARFRAADDTR QEAYAKLLAL KKQLHEKSKN FWEYRDAATK AQELAAGGKK EELQCFCVDE VERIMELWNK NDEFRRDYVR
1001: CNTRSTLRRL QTLDGRSLGP DEEPLVMPNA ITERASKNIP MVSNTTMEQE KKSPRESVNV KDEPDSKVVA QRTETSQTTK AKKPTKPAPL EKHVARWGDE
1101: SDEDEDKDKN EEEPVRTKEE EELILKAEKA RKEEEEAKLK EKRRLEEIEK AKEALQRKKR NAEKAQQRAA LKAQKEAELK EKEREKRAKK KERRKTSSAV
1201: TAENTEQESA HTTETLTSVE ESDLTEKPAE VTKKPQKPSQ FTRQTKVKSV PAALRNRAKR RIQPWMWVLI AVVVVVALFY VGNSSSLRSS LEGFGY
0001: MPVEVERDQG EVSVKVDFEN ATEIKPEVVV SATKEDVVNG ISHGGSNNGN GNDTDGSYDF ITENDTVGDD FVESDYVKPV DDANVEKDLK EGENVKVDAP
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
0101: SIADDDVLGV SQDSQTLEKS ELESTDDGPE EVVEIPKSEV EDSLEKSVDQ QHPGNGHLES GLEGKVESKE EVEQLHDSEV GSKDLTKNNV EEPEVEIESD
0201: SETDVEGHQG DKIEAQEKSD RDLDVSQDLK LNENVEKHPV DSDEVRESEL VSAKVSPTEP SDGGMDLGQP TVTDPAETIN GSESVNDHVG SEPVTVLEPV
0301: SVENGHPPVE SELERSSDVP FTSVAEKVNA SDGEVLPDSG TVDVVVSEVS SDVPAETQAL NAISLDSQPS GKDSVVENGN SKSESEDSKM QSEIGAVDDG
0401: SVSDGSINTH PESQDASDPT CDQGGKQHIS SEVKEVLDAP ASEEISDAVI VAKDNGSEAA ISDGLSCTNQ QGSESDEISG LVEKLPSHAL HEVVSSANDT
0501: SVIVSDDTKS QGLSEDHGVD TNQTIQDDCS AELEEVTDVN VKHAPNEKVQ GDNSEGNLNV GGDVCLNSAE EAKELPTGDL SGNASHESAE TLSTNIDEPL
0601: SLLDTKTAVS DFAESSAGVA GEIDAVAMES EAAQSIKQCA EAHVAPSIIE DGEIDREVNC GSEVNVTKTT PVAVREDIPP KEVSEMEESD VKERSSINTD
0701: EEVATASVAS EIKTCAQDLE SKVVTSTDTI HTGAKDCVDS QPAENKEGNV VDRTDDKVAS TGEVSVLDAS EGLTVAAEIE KRPFYFLPRV PRYDDEKLAE
0801: QLKHAEEQVD QKTQNRDALR ADIQKIRAIC KDYDISYKAV MAEERSARKA MHSKRQEIEA LQSMISRVKS AASVDDIDSR VRNMEHTMQH TTLSLNEEKG
0901: FMREIKQLKQ LREQISSSMG TKDEVKQALD EKEKTEERLK VLRKELDALR NDLSKAEEIT KAAKKKCDGE WEAQSKLQEQ FRAADAVRQE AFVHLQDLKK
1001: QQREKNKYFF KYRDNSRAAS EMALKKDRAA LQSLCSDQVE NFMNMWNNDD EFRKYYVKSN TRSTFRRLGT LDGRSLGPDE EPPRITYAPR TDKLRTSSDR
1101: AEKHEAVPAQ KEKVVKFEGS KVENNGKEVA KPTEQKSQTT KSKKAVKPDQ PPSIVTELVS GKEEIEKSAT PEEEEPPKLT KEEEELIKKE EEKRKQKEAA
1201: KMKEQHRLEE IAKAKEAMER KKKREEKAKA RAVLKAQKEA EEREKEREKK LRKKERRKGI FTSEETATEN PIPTAETVVE TPREIETPKK QTVEESQQMK
1301: KSHKPSSQFL KQNKSKSVPL PLRNRGSKRK LRQWMWIGLI VVIIIALFLL GNANLSSPAN LWFT
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1) /.../30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G20970]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.