Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G380100.1 | Wheat | cytosol | 96.43 | 96.43 |
| TraesCSU01G130300.1 | Wheat | cytosol | 95.24 | 94.67 |
| TraesCS2A01G229100.1 | Wheat | cytosol | 91.67 | 91.67 |
| Zm00001d021529_P002 | Maize | cytosol, extracellular, mitochondrion | 73.21 | 80.92 |
| Os07t0500300-01 | Rice | extracellular | 81.55 | 79.19 |
| EER99403 | Sorghum | cytosol | 78.57 | 77.19 |
| TraesCS6A01G394700.1 | Wheat | cytosol, endoplasmic reticulum | 49.4 | 49.7 |
| TraesCS2A01G229200.1 | Wheat | endoplasmic reticulum, extracellular | 48.81 | 49.4 |
| TraesCS2A01G261500.1 | Wheat | cytosol | 45.83 | 47.83 |
| TraesCS2A01G261400.1 | Wheat | cytosol | 46.43 | 45.88 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 45.83 | 45.29 |
| HORVU2Hr1G048940.1 | Barley | cytosol, plastid | 34.52 | 42.34 |
| TraesCS5A01G169300.1 | Wheat | cytosol | 33.33 | 32.75 |
| TraesCS6A01G285400.2 | Wheat | golgi | 39.88 | 20.18 |
| TraesCS6A01G160700.1 | Wheat | cytosol | 36.31 | 18.89 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 35.71 | 16.0 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G546300.1 | EnsemblPlantsGene:TraesCS5A01G546300 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF321 | PFAM:PF00168 | PFscan:PS50004 | SMART:SM00239 |
| SUPFAM:SSF49562 | TIGR:cd04038 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:+:700595801..700597235
Molecular Weight (calculated)
18267.1 Da
IEP (calculated)
7.071
GRAVY (calculated)
0.060
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEPVIGKL SVRVVRGHNL IVADPLTHTS DPYVVLCYGS QKVKTSVQKK NVNPLWNDVL VLPVTDLTKP VKLEVFDADT FTADDSMGVA EFTVTDIYDA
101: AKLDLKHASD GTRIKTIYPV GTNYLGGESH VSWKNGKVVQ DLILKLKNVG SGSVVLQLEW VHVPGVAL
101: AKLDLKHASD GTRIKTIYPV GTNYLGGESH VSWKNGKVVQ DLILKLKNVG SGSVVLQLEW VHVPGVAL
001: MENLVGLLRI RVKRGINLVS RDSNTSDPFV VVTMGSQKLK TRGVENSCNP EWDDELTLGI NDPNQHVTLE VYDKDTFTSH DPMGDAEIDI KPFFEVQGTD
101: IQELTNGTEI RRVKPSGDNC LAEESRIIFS NGKILQDMIL QLRNVESGEV EIQIEWINVT GSSDF
101: IQELTNGTEI RRVKPSGDNC LAEESRIIFS NGKILQDMIL QLRNVESGEV EIQIEWINVT GSSDF
Arabidopsis Description
CAR8Protein C2-DOMAIN ABA-RELATED 8 [Source:UniProtKB/Swiss-Prot;Acc:O49303]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.