Factsheet for Zm00001d021529_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99403	Sorghum	cytosol	96.71	85.96
Os07t0500300-01	Rice	extracellular	86.18	75.72
TraesCS2D01G233300.1	Wheat	cytosol	83.55	75.6
TraesCS2A01G229100.1	Wheat	cytosol	81.58	73.81
TraesCS2B01G250500.2	Wheat	cytosol	81.58	73.81
TraesCS5A01G546300.1	Wheat	cytosol	80.92	73.21
TraesCSU01G130300.1	Wheat	cytosol	80.92	72.78
TraesCS4B01G380100.1	Wheat	cytosol	80.26	72.62
Zm00001d006447_P001	Maize	mitochondrion	52.63	48.19
Zm00001d011396_P001	Maize	cytosol	47.37	40.91
HORVU2Hr1G048940.1	Barley	cytosol, plastid	36.18	40.15
Zm00001d044179_P001	Maize	cytosol	43.42	32.84
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	45.39	31.8
Zm00001d019836_P003	Maize	cytosol	35.53	28.72
Zm00001d015804_P005	Maize	cytosol, mitochondrion	38.82	18.32
Zm00001d017881_P001	Maize	cytosol	39.47	18.07
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	39.47	17.65
Zm00001d038063_P001	Maize	nucleus	32.24	12.73
Zm00001d036830_P005	Maize	plastid	39.47	10.19
Zm00001d034981_P001	Maize	cytosol	9.87	7.85
Zm00001d005398_P001	Maize	cytosol	16.45	6.94
Zm00001d007340_P001	Maize	cytosol	14.47	5.93
Zm00001d011855_P002	Maize	cytosol	34.87	5.04

Protein Annotations

EnsemblPlants:Zm00001d021529_P002	EnsemblPlants:Zm00001d021529_T002	EnsemblPlantsGene:Zm00001d021529	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF321	PFAM:PF00168	ProteinID:ONM57409.1
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000843767E	UniProt:A0A1D6IBV9	MapMan:35.1

Description

Protein C2-DOMAIN ABA-RELATED 4

Coordinates

chr7:-:155183894..155186161

Molecular Weight (calculated)

16766.2 Da

IEP (calculated)

6.973

GRAVY (calculated)

-0.201

Length

152 amino acids

Sequence
(BLAST)

001: MASASKEEVI GKLNVRVVRG NNLVIADPLT HTSDPYVVLQ YGAQKVKTSV QKKNPNPEVF DEDKFTADDS MGVAEINITD IYDAAKLDLK HASDGTRIKT
101: IYPVGVNYLG GESHVQWKDG KVVQDLILKL RKVESGLIVV QLEWVHVPGV KL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.