Factsheet for Zm00001d051676_P007

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

extracellular 4
golgi 5
plasma membrane 4
endoplasmic reticulum 5
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017881_P001	Maize	cytosol	82.94	84.94
EES05611	Sorghum	cytosol	81.76	83.73
Os02t0722500-01	Rice	cytosol	74.71	76.51
TraesCS6A01G285400.2	Wheat	golgi	71.47	73.19
Zm00001d034981_P001	Maize	cytosol	38.24	68.06
GSMUA_Achr9P12760_001	Banana	cytosol	59.12	61.09
GSMUA_Achr9P27900_001	Banana	cytosol	60.0	58.79
Zm00001d015804_P005	Maize	cytosol, mitochondrion	54.12	57.14
TraesCS6D01G265900.2	Wheat	cytosol	71.76	55.71
HORVU6Hr1G071850.3	Barley	mitochondrion	71.76	55.33
TraesCS6B01G314300.1	Wheat	cytosol	69.12	52.57
Zm00001d005398_P001	Maize	cytosol	53.24	50.28
Zm00001d007340_P001	Maize	cytosol	51.47	47.17
Zm00001d021529_P002	Maize	cytosol, extracellular, mitochondrion	17.65	39.47
Zm00001d011396_P001	Maize	cytosol	19.12	36.93
Zm00001d006447_P001	Maize	mitochondrion	17.94	36.75
Zm00001d038063_P001	Maize	nucleus	38.24	33.77
Zm00001d044179_P001	Maize	cytosol	19.41	32.84
Zm00001d019836_P003	Maize	cytosol	17.94	32.45
Zm00001d036830_P005	Maize	plastid	54.71	31.58
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	17.06	26.73
Zm00001d011855_P002	Maize	cytosol	38.53	12.46

Protein Annotations

EntrezGene:100272989	Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	UniProt:A0A1D6Q972	ProteinID:AQK54931.1
InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892
InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF291	SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863
TMHMM:TMhelix	UniParc:UPI0008435CA5	EnsemblPlantsGene:Zm00001d051676	EnsemblPlants:Zm00001d051676_P007	EnsemblPlants:Zm00001d051676_T007	SEG:seg

Description

ADP-ribosylation factor GTPase-activating protein AGD12

Coordinates

chr4:-:166358699..166362812

Molecular Weight (calculated)

38492.2 Da

IEP (calculated)

6.318

GRAVY (calculated)

-0.149

Length

340 amino acids

Sequence
(BLAST)

001: MQWSVHVHTQ SFAAISMPLI TYFIFRLIMH STLFYFFVSL YIICKRYLLF VHFRSTNIGV FLCLKCGDVH RALGPDISKV LSVTLDDWSD SDIDSMVEVG
101: GNSYANSIYE AFLPKDHPKP KPDSTMEYRT KFIRAKYETQ DFLKPSLRIS SRSSFKSTNS VKSVDSNFSS TSRKDISEDT REFVGELNIT VVKGTNLAVR
201: DMLTSDPYVV LTLGGQKAQS TVKKSDLNPV WNEMLKISVP RNYGPLKLEV YDHDTFSADD IMGEAEIDLQ PMITAAMAFG DTSRLGDMQI GRWFTTKDNA
301: LMKDSTVNVV AGKVKQEVHL KLQNVESGEL ELELEWVPIL

Best Arabidopsis Sequence Match ( AT4G05330.2 )
(BLAST)

001: MGLVFRSANI GVFICLKCCG VHRSLGTHIS KVLSVTLDEW SDEEVDSMIE IGGNASANSI YEAFLPDTCS KPGPDVNHDQ RMRFIRAKYE LQEFLKPSLR
101: ITSGKGSTKS SAFLTSSLSR KIMDSFRTNS SSQTMFQEGM VEFIGLLKVT IKKGTNLAIR DMMSSDPYVV LNLGKQKLQT TVMNSNLNPV WNQELMLSVP
201: ESYGPVKLQV YDYDTFSADD IMGEADIDIQ PLITSAMAFG DPEMFGDMQI GKWLKSHDNP LIDDSIINIV DGKVKQEVQI KLQNVESGEL ELEMEWLPLD
301: Q

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.