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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d005029_P001
Zm00001d052380_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G01540.1 Zm00001d005029_P001 AT3G54220.1 19228333
AT2G01540.1 Zm00001d052380_P001 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01097 Sorghum cytosol 83.52 88.55
Os02t0327000-01 Rice cytosol 76.7 81.82
TraesCS2B01G529400.1 Wheat mitochondrion 72.73 75.29
TraesCS2A01G501300.1 Wheat mitochondrion 72.16 74.71
TraesCS2D01G501800.2 Wheat mitochondrion 72.16 74.71
Zm00001d044179_P001 Maize cytosol 84.09 73.63
HORVU0Hr1G039050.2 Barley mitochondrion 70.45 73.37
GSMUA_Achr10P... Banana cytosol 62.5 67.9
GSMUA_Achr6P07630_001 Banana cytosol 60.23 63.86
GSMUA_Achr2P15950_001 Banana cytosol 59.66 60.69
KRG97928 Soybean cytosol 56.25 60.0
Solyc03g118720.2.1 Tomato cytosol, mitochondrion 55.68 59.39
KRH30951 Soybean cytosol 55.11 58.79
VIT_14s0006g01250.t01 Wine grape cytosol 55.11 58.79
Solyc12g040800.1.1 Tomato cytosol 55.11 58.43
KRH41845 Soybean cytosol 53.98 57.58
PGSC0003DMT400078786 Potato cytosol 53.98 57.58
Solyc02g063360.2.1 Tomato cytosol 53.98 57.23
Solyc02g063370.2.1 Tomato cytosol 53.98 57.23
Solyc02g091520.2.1 Tomato cytosol, mitochondrion 53.41 56.97
Solyc03g118710.2.1 Tomato cytosol 52.84 56.36
VIT_17s0000g02290.t01 Wine grape cytosol, plastid 57.39 55.8
KRH48640 Soybean cytosol 55.68 55.68
VIT_01s0011g05230.t01 Wine grape cytosol 52.27 55.42
CDY47746 Canola mitochondrion 52.84 55.36
PGSC0003DMT400037472 Potato cytosol 56.82 55.25
Bra008104.1-P Field mustard cytosol, mitochondrion 52.27 54.76
CDX82060 Canola mitochondrion 52.27 54.76
Bra014145.1-P Field mustard mitochondrion 52.84 54.71
CDX77307 Canola mitochondrion 52.84 54.71
CDY16452 Canola mitochondrion 52.84 54.71
AT1G70810.1 Thale cress cytosol 51.14 54.55
PGSC0003DMT400074100 Potato cytosol 51.14 54.55
Solyc06g068940.2.1 Tomato cytosol 51.14 54.55
KRH60540 Soybean cytosol 53.41 54.34
Zm00001d006447_P001 Maize mitochondrion 51.14 54.22
Bra018410.1-P Field mustard mitochondrion 51.14 53.57
CDY27005 Canola cytosol 51.14 53.57
CDY38572 Canola mitochondrion 51.14 53.57
AT3G17980.1 Thale cress cytosol 53.41 53.11
CDX75953 Canola cytosol 53.41 53.11
CDY51927 Canola cytosol 53.41 53.11
CDY01709 Canola mitochondrion 50.0 52.38
KRH39062 Soybean cytosol 32.39 52.29
CDY71117 Canola cytosol 47.16 51.88
AT1G73580.1 Thale cress mitochondrion 49.43 51.79
Bra025441.1-P Field mustard cytosol 49.43 51.79
Bra028148.1-P Field mustard mitochondrion 49.43 51.79
CDX74561 Canola mitochondrion 49.43 51.79
CDX99693 Canola cytosol 49.43 51.79
Bra024565.1-P Field mustard cytosol 46.59 51.25
CDY04742 Canola cytosol 46.59 51.25
CDY71433 Canola cytosol 46.59 51.25
Bra028147.1-P Field mustard cytosol 48.86 51.19
Bra016185.1-P Field mustard cytosol 47.73 50.91
CDX96279 Canola cytosol 47.73 50.91
CDY11543 Canola cytosol 47.73 50.91
Bra001693.1-P Field mustard cytosol 51.14 50.85
CDX74562 Canola cytosol 47.73 50.3
AT5G37740.2 Thale cress cytosol 50.57 50.0
CDY11544 Canola cytosol 51.7 49.19
KRH50393 Soybean cytosol 47.16 48.82
Bra016186.1-P Field mustard cytosol 51.14 48.65
CDX96278 Canola cytosol 51.14 48.65
CDY27654 Canola cytosol 49.43 48.6
Bra004161.1-P Field mustard cytosol 48.3 48.57
CDX96152 Canola cytosol 48.3 48.57
KRH39078 Soybean endoplasmic reticulum, extracellular 56.25 48.53
AT2G01540.1 Thale cress cytosol 49.43 48.33
Bra024877.1-P Field mustard cytosol 49.43 48.33
CDY17665 Canola cytosol 49.43 48.33
CDY58016 Canola cytosol 49.43 48.33
KRH38191 Soybean cytosol 49.43 48.33
AT1G48590.2 Thale cress cytosol, plasma membrane 54.55 48.0
CDY07499 Canola cytosol 47.73 48.0
KRG94240 Soybean cytosol 46.02 47.93
AT1G23140.1 Thale cress cytosol, mitochondrion 44.89 47.88
KRG89347 Soybean cytosol 18.18 47.76
AT1G70790.1 Thale cress cytosol 50.0 47.57
Zm00001d021529_P002 Maize cytosol, extracellular, mitochondrion 40.91 47.37
Bra017445.1-P Field mustard cytosol 48.3 47.22
CDY04090 Canola cytosol 48.3 47.22
AT1G66360.1 Thale cress cytosol 46.59 47.13
Solyc06g053390.2.1 Tomato cytosol, mitochondrion 44.32 46.71
Bra026650.1-P Field mustard cytosol 47.73 46.67
CDY09436 Canola cytosol 47.73 46.67
CDY48816 Canola cytosol 47.73 46.67
CDY70365 Canola cytosol 47.73 46.67
PGSC0003DMT400042134 Potato cytosol 35.8 46.67
AT1G70800.1 Thale cress cytosol 45.45 45.98
KRG94243 Soybean cytosol, mitochondrion 45.45 45.98
CDY23479 Canola cytosol 47.16 44.86
PGSC0003DMT400020051 Potato cytosol 39.77 42.68
Solyc04g007800.2.1 Tomato cytosol 40.34 42.52
PGSC0003DMT400059720 Potato cytosol 39.77 41.92
Zm00001d018668_P002 Maize cytosol, extracellular, plastid 49.43 40.09
CDY23477 Canola cytosol 26.14 36.8
Zm00001d019836_P003 Maize cytosol 36.36 34.04
Bra003941.1-P Field mustard cytosol 47.16 32.81
CDY70119 Canola cytosol 47.16 32.81
CDY49631 Canola extracellular 22.16 32.5
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 41.48 30.93
Bra003940.1-P Field mustard cytosol 24.43 30.71
CDX68329 Canola cytosol 23.86 30.43
Zm00001d015804_P005 Maize cytosol, mitochondrion 36.36 19.88
Zm00001d017881_P001 Maize cytosol 36.36 19.28
Zm00001d038063_P001 Maize nucleus 42.05 19.22
Zm00001d051676_P007 Maize endoplasmic reticulum, golgi 36.93 19.12
Zm00001d036830_P005 Maize plastid 41.48 12.39
Zm00001d005398_P001 Maize cytosol 19.32 9.44
Zm00001d034981_P001 Maize cytosol 9.09 8.38
Zm00001d007340_P001 Maize cytosol 15.91 7.55
Zm00001d011855_P002 Maize cytosol 41.48 6.95
CDY23476 Canola cytosol 0.57 0.85
Protein Annotations
EMBL:EU973451EnsemblPlants:Zm00001d011396_P001EnsemblPlants:Zm00001d011396_T001EnsemblPlantsGene:Zm00001d011396EntrezGene:103636093InterPro:C2_dom
InterPro:IPR000008PANTHER:PTHR23180PANTHER:PTHR23180:SF310PFAM:PF00168PFscan:PS50004ProteinID:AQK96770.1
SMART:SM00239SUPFAM:SSF49562UniParc:UPI0000E64894UniProt:B6U886MapMan:11.1.2.1.2:
Description
GTPase activating protein%3B Putative calcium-dependent lipid-binding (CaLB domain) family protein
Coordinates
chr8:+:149473967..149475758
Molecular Weight (calculated)
19699.3 Da
IEP (calculated)
9.522
GRAVY (calculated)
-0.127
Length
176 amino acids
Sequence
(BLAST)
001: MVGKKRGVIS PLDHLAGLLE VRVVRGVDLA IRDLRSSDPY VVLRIGKAQK VKTRVVKKSI NPEWNEKLTL SIEDPAVPIR LEVFDKDTFV DDAMGNAELD
101: IRPLVEIVKM KLQGVADKTV VKKLVPNRQN CLAEESSIYI SEGKVKQDLV VRLRNVECGE IELQLQWVHL PGSKGV
Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)
001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
Arabidopsis Description
CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.