Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400043358 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01540.1 | PGSC0003DMT400043358 | AT3G54220.1 | 19228333 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020051 | Potato | cytosol | 95.21 | 96.95 |
| Solyc04g007800.2.1 | Tomato | cytosol | 94.61 | 94.61 |
| PGSC0003DMT400042134 | Potato | cytosol | 50.3 | 62.22 |
| VIT_01s0011g05230.t01 | Wine grape | cytosol | 52.69 | 53.01 |
| AT1G70810.1 | Thale cress | cytosol | 52.1 | 52.73 |
| AT1G23140.1 | Thale cress | cytosol, mitochondrion | 51.5 | 52.12 |
| Bra016185.1-P | Field mustard | cytosol | 50.9 | 51.52 |
| Bra024565.1-P | Field mustard | cytosol | 49.1 | 51.25 |
| KRG94240 | Soybean | cytosol | 49.7 | 49.11 |
| GSMUA_Achr10P... | Banana | cytosol | 46.71 | 48.15 |
| KRH38191 | Soybean | cytosol | 50.9 | 47.22 |
| KRH50393 | Soybean | cytosol | 47.9 | 47.06 |
| Bra017445.1-P | Field mustard | cytosol | 50.3 | 46.67 |
| PGSC0003DMT400074100 | Potato | cytosol | 46.11 | 46.67 |
| Bra024877.1-P | Field mustard | cytosol | 49.7 | 46.11 |
| PGSC0003DMT400078786 | Potato | cytosol | 45.51 | 46.06 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 47.31 | 45.66 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 46.11 | 45.56 |
| AT2G01540.1 | Thale cress | cytosol | 49.1 | 45.56 |
| Os02t0327000-01 | Rice | cytosol | 44.91 | 45.45 |
| EES01097 | Sorghum | cytosol | 44.91 | 45.18 |
| Bra026650.1-P | Field mustard | cytosol | 48.5 | 45.0 |
| AT1G70800.1 | Thale cress | cytosol | 46.71 | 44.83 |
| KRG89347 | Soybean | cytosol | 17.96 | 44.78 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 45.51 | 44.71 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 45.51 | 44.71 |
| KRG94243 | Soybean | cytosol, mitochondrion | 46.11 | 44.25 |
| PGSC0003DMT400037472 | Potato | cytosol | 47.9 | 44.2 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 44.91 | 44.12 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 43.11 | 43.37 |
| AT1G70790.1 | Thale cress | cytosol | 47.9 | 43.24 |
| Bra016186.1-P | Field mustard | cytosol | 47.9 | 43.24 |
| Zm00001d011396_P001 | Maize | cytosol | 41.92 | 39.77 |
| Zm00001d044179_P001 | Maize | cytosol | 46.11 | 38.31 |
| PGSC0003DMT400038836 | Potato | cytosol | 34.73 | 34.32 |
| PGSC0003DMT400034618 | Potato | cytosol | 32.93 | 32.74 |
| Bra003941.1-P | Field mustard | cytosol | 47.9 | 31.62 |
| Bra003940.1-P | Field mustard | cytosol | 20.36 | 24.29 |
| PGSC0003DMT400068533 | Potato | cytosol | 37.13 | 15.7 |
| CDY23476 | Canola | cytosol | 1.2 | 1.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059720 | EnsemblPlantsGene:PGSC0003DMG400023218 | EntrezGene:102585714 | InterPro:C2_dom | InterPro:IPR000008 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF296 | PFAM:PF00168 | PFscan:PS50004 | PGSC:PGSC0003DMG400023218 | RefSeq:XP_006367634.1 | SMART:SM00239 |
| SUPFAM:SSF49562 | UniParc:UPI0002963C26 | UniProt:M1C4N0 | MapMan:11.1.2.1.2 | : | : |
Description
C2 domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400023218]
Coordinates
chr00:+:22623592..22626949
Molecular Weight (calculated)
18993.2 Da
IEP (calculated)
6.259
GRAVY (calculated)
-0.285
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGLVKIRVH KGINLPLKDT FHSDPYVVVT MGDQKVKTSC KKNNCNPVWD DELTLALKNP NVQIVLTVYD KDTFSKDDKI GEAKIDIKPY LKALEMSYHQ
101: DLPNGVKVDK VQQNRDNCLA KESCIIWENG KLIQDMTLIL QNVECGEVKL QIEVIPKMLS EDAFYIA
101: DLPNGVKVDK VQQNRDNCLA KESCIIWENG KLIQDMTLIL QNVECGEVKL QIEVIPKMLS EDAFYIA
001: MEELVGLLRI RVKRGINLAQ RDTLSSDPFV VITMGSQKLK TRVVENNCNP EWNEELTLAL RHPDEPVNLI VYDKDTFTSH DKMGDAKIDI KPFLEVHKMG
101: LQELPDGTEI KRVVPNRENC LAEASSIVSN NGKIVQNMIL LLRNVECGEV EIQLEWIDIP GSRGL
101: LQELPDGTEI KRVVPNRENC LAEASSIVSN NGKIVQNMIL LLRNVECGEV EIQLEWIDIP GSRGL
Arabidopsis Description
CAR7Protein C2-DOMAIN ABA-RELATED 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSL1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.