CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG22896
OQU82754

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01540.1	KXG22896	AT3G54220.1	19228333
AT2G01540.1	OQU82754	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0327000-01	Rice	cytosol	84.94	85.45
Zm00001d011396_P001	Maize	cytosol	88.55	83.52
TraesCS2B01G529400.1	Wheat	mitochondrion	80.12	78.24
TraesCS2D01G501800.2	Wheat	mitochondrion	80.12	78.24
HORVU0Hr1G039050.2	Barley	mitochondrion	78.92	77.51
TraesCS2A01G501300.1	Wheat	mitochondrion	78.92	77.06
Zm00001d044179_P001	Maize	cytosol	90.36	74.63
GSMUA_Achr10P...	Banana	cytosol	67.47	69.14
GSMUA_Achr6P07630_001	Banana	cytosol	64.46	64.46
GSMUA_Achr2P15950_001	Banana	cytosol	66.27	63.58
KRG97928	Soybean	cytosol	60.84	61.21
KRH30951	Soybean	cytosol	60.24	60.61
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	59.64	60.0
VIT_14s0006g01250.t01	Wine grape	cytosol	59.64	60.0
Solyc12g040800.1.1	Tomato	cytosol	59.04	59.04
KRH41845	Soybean	cytosol	58.43	58.79
PGSC0003DMT400078786	Potato	cytosol	57.83	58.18
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	57.83	58.18
Solyc02g063360.2.1	Tomato	cytosol	57.83	57.83
Bra014145.1-P	Field mustard	mitochondrion	59.04	57.65
CDY16452	Canola	mitochondrion	59.04	57.65
AT1G70810.1	Thale cress	cytosol	57.23	57.58
CDX77307	Canola	mitochondrion	58.43	57.06
PGSC0003DMT400074100	Potato	cytosol	56.63	56.97
Solyc02g063370.2.1	Tomato	cytosol	56.63	56.63
VIT_01s0011g05230.t01	Wine grape	cytosol	56.63	56.63
Solyc03g118710.2.1	Tomato	cytosol	56.02	56.36
Solyc06g068940.2.1	Tomato	cytosol	56.02	56.36
CDY71117	Canola	cytosol	54.22	56.25
EER97836	Sorghum	cytosol	55.42	55.76
EER97258	Sorghum	mitochondrion	56.02	55.69
KRH48640	Soybean	cytosol	59.04	55.68
KRH60540	Soybean	cytosol	57.83	55.49
PGSC0003DMT400037472	Potato	cytosol	59.64	54.7
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	59.64	54.7
Bra024565.1-P	Field mustard	cytosol	52.41	54.38
CDY04742	Canola	cytosol	52.41	54.38
CDY71433	Canola	cytosol	52.41	54.38
Bra018410.1-P	Field mustard	mitochondrion	54.82	54.17
CDY01709	Canola	mitochondrion	54.82	54.17
CDY27005	Canola	cytosol	54.82	54.17
CDY38572	Canola	mitochondrion	54.82	54.17
KRG89347	Soybean	cytosol	21.69	53.73
AT3G17980.1	Thale cress	cytosol	57.23	53.67
CDX75953	Canola	cytosol	57.23	53.67
CDY51927	Canola	cytosol	57.23	53.67
Bra025441.1-P	Field mustard	cytosol	54.22	53.57
CDX82060	Canola	mitochondrion	54.22	53.57
CDY47746	Canola	mitochondrion	54.22	53.57
Bra008104.1-P	Field mustard	cytosol, mitochondrion	53.61	52.98
Bra028147.1-P	Field mustard	cytosol	53.61	52.98
CDX99693	Canola	cytosol	53.61	52.98
Bra001693.1-P	Field mustard	cytosol	56.02	52.54
Bra028148.1-P	Field mustard	mitochondrion	53.01	52.38
CDX74561	Canola	mitochondrion	53.01	52.38
KRH50393	Soybean	cytosol	53.61	52.35
Bra016185.1-P	Field mustard	cytosol	51.81	52.12
CDX96279	Canola	cytosol	51.81	52.12
CDY11543	Canola	cytosol	51.81	52.12
AT1G23140.1	Thale cress	cytosol, mitochondrion	51.2	51.52
CDX74562	Canola	cytosol	51.81	51.5
KRH39062	Soybean	cytosol	33.73	51.38
AT5G37740.2	Thale cress	cytosol	54.82	51.12
AT1G73580.1	Thale cress	mitochondrion	51.2	50.6
KRH38191	Soybean	cytosol	54.82	50.56
KRG94240	Soybean	cytosol	51.2	50.3
CDY27654	Canola	cytosol	54.22	50.28
CDY11544	Canola	cytosol	56.02	50.27
Bra016186.1-P	Field mustard	cytosol	55.42	49.73
CDX96278	Canola	cytosol	55.42	49.73
Bra004161.1-P	Field mustard	cytosol	52.41	49.71
CDX96152	Canola	cytosol	52.41	49.71
AT1G66360.1	Thale cress	cytosol	51.81	49.43
CDY07499	Canola	cytosol	51.81	49.14
AT1G48590.2	Thale cress	cytosol, plasma membrane	59.04	49.0
AT2G01540.1	Thale cress	cytosol	53.01	48.89
Bra024877.1-P	Field mustard	cytosol	53.01	48.89
CDY17665	Canola	cytosol	53.01	48.89
CDY58016	Canola	cytosol	53.01	48.89
AT1G70800.1	Thale cress	cytosol	50.6	48.28
AT1G70790.1	Thale cress	cytosol	53.61	48.11
Bra017445.1-P	Field mustard	cytosol	51.81	47.78
Bra026650.1-P	Field mustard	cytosol	51.81	47.78
CDY04090	Canola	cytosol	51.81	47.78
CDY09436	Canola	cytosol	51.81	47.78
CDY48816	Canola	cytosol	51.81	47.78
CDY70365	Canola	cytosol	51.81	47.78
KRG94243	Soybean	cytosol, mitochondrion	50.0	47.7
KRH39078	Soybean	endoplasmic reticulum, extracellular	58.43	47.55
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	47.59	47.31
PGSC0003DMT400042134	Potato	cytosol	37.95	46.67
EER99403	Sorghum	cytosol	47.59	46.2
PGSC0003DMT400020051	Potato	cytosol	45.18	45.73
CDY23479	Canola	cytosol	50.6	45.41
PGSC0003DMT400059720	Potato	cytosol	45.18	44.91
Solyc04g007800.2.1	Tomato	cytosol	44.58	44.31
CDY23477	Canola	cytosol	28.31	37.6
OQU88318	Sorghum	mitochondrion	50.6	33.6
Bra003941.1-P	Field mustard	cytosol	51.2	33.6
CDY70119	Canola	cytosol	51.2	33.6
CDY49631	Canola	extracellular	24.1	33.33
CDX68329	Canola	cytosol	25.9	31.16
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	43.98	30.93
Bra003940.1-P	Field mustard	cytosol	25.9	30.71
EER88634	Sorghum	cytosol	43.98	22.05
EES18146	Sorghum	cytosol	45.78	19.74
KXG29722	Sorghum	cytosol	36.75	19.49
EES05611	Sorghum	cytosol	37.35	18.67
CDY23476	Canola	cytosol	0.6	0.85

Protein Annotations

MapMan:11.1.2.1.2	EntrezGene:8084850	InterPro:C2_dom	UniProt:C5XR69	EnsemblPlants:EES01097	ProteinID:EES01097
ProteinID:EES01097.1	GO:GO:0003674	GO:GO:0005096	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009628	GO:GO:0009651	GO:GO:0030234	GO:GO:0043547	GO:GO:1901002
GO:GO:1902479	InterPro:IPR000008	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310
SMART:SM00239	EnsemblPlantsGene:SORBI_3003G225900	SUPFAM:SSF49562	unigene:Sbi.473	UniParc:UPI0001A84387	RefSeq:XP_002455977.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:56238857..56240954

Molecular Weight (calculated)

18827.0 Da

IEP (calculated)

7.419

GRAVY (calculated)

-0.189

Length

166 amino acids

Sequence
(BLAST)

001: MLDHLVGLVK VRVVRGVNLA IRDLRSSDPY VVVRIGKQKL KTRVVKKSTN PEWNEELTLS IEDPAVPVRL EVFDKDTFVD DTMGNAEVDI RPLVEIVKMK
101: LQDVADKTVV KKLVPNRQNC LAEESSIYIS EGKVKQDLVL RLRNVECGEI ELQLHWVDLP GSKLTT

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.