Factsheet for Solyc03g118710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	87.88	87.88
Solyc06g068940.2.1	Tomato	cytosol	78.18	78.18
Solyc12g040800.1.1	Tomato	cytosol	75.76	75.3
KRH41845	Soybean	cytosol	74.55	74.55
KRH48640	Soybean	cytosol	78.79	73.86
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	79.39	72.38
KRH60540	Soybean	cytosol	74.55	71.1
CDY16452	Canola	mitochondrion	72.73	70.59
CDX77307	Canola	mitochondrion	72.73	70.59
Bra014145.1-P	Field mustard	mitochondrion	72.73	70.59
CDX82060	Canola	mitochondrion	70.91	69.64
CDY51927	Canola	cytosol	74.55	69.49
AT3G17980.1	Thale cress	cytosol	74.55	69.49
CDY47746	Canola	mitochondrion	70.3	69.05
KRH39062	Soybean	cytosol	45.45	68.81
Bra008104.1-P	Field mustard	cytosol, mitochondrion	69.7	68.45
CDX75953	Canola	cytosol	73.33	68.36
AT1G73580.1	Thale cress	mitochondrion	68.48	67.26
Bra001693.1-P	Field mustard	cytosol	71.52	66.67
Solyc02g063370.2.1	Tomato	cytosol	66.06	65.66
GSMUA_Achr10P...	Banana	cytosol	64.24	65.43
GSMUA_Achr6P07630_001	Banana	cytosol	65.45	65.06
Solyc02g063360.2.1	Tomato	cytosol	65.45	65.06
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	64.85	64.85
KRH39078	Soybean	endoplasmic reticulum, extracellular	79.39	64.22
GSMUA_Achr2P15950_001	Banana	cytosol	65.45	62.43
AT1G48590.2	Thale cress	cytosol, plasma membrane	72.73	60.0
Os02t0327000-01	Rice	cytosol	58.79	58.79
TraesCS2A01G501300.1	Wheat	mitochondrion	59.39	57.65
HORVU0Hr1G039050.2	Barley	mitochondrion	58.18	56.8
TraesCS2B01G529400.1	Wheat	mitochondrion	58.18	56.47
TraesCS2D01G501800.2	Wheat	mitochondrion	58.18	56.47
EES01097	Sorghum	cytosol	56.36	56.02
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	55.76	55.09
Zm00001d011396_P001	Maize	cytosol	56.36	52.84
Solyc04g007800.2.1	Tomato	cytosol	47.88	47.31
Zm00001d044179_P001	Maize	cytosol	57.58	47.26
Solyc04g015070.2.1	Tomato	cytosol	38.18	37.28
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	43.64	21.75
Solyc08g043140.2.1	Tomato	cytosol	40.61	16.96

Protein Annotations

EnsemblPlants:Solyc03g118710.2.1	EnsemblPlantsGene:Solyc03g118710.2	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004	SMART:SM00239
SUPFAM:SSF49562	UniParc:UPI0002765FBD	UniProt:K4BM20	MapMan:11.1.2.1.2	:	:

Description

No Description!

Coordinates

chr3:+:67556479..67559307

Molecular Weight (calculated)

18594.6 Da

IEP (calculated)

5.043

GRAVY (calculated)

-0.250

Length

165 amino acids

Sequence
(BLAST)

001: MENLLGLLRI RVKKGVNLAV RDVRSSDTYV VIQMAEQKLK TRVIKKDVNP EWNEDLTLSV ADPNLPVMLT VYDHDSFSKD DKMGDAEFDI KPLIEALKMN
101: LSGLPEGTII TRIQPSRSNC LSGESNIVWK DGQVVQDMCL RLRNVECGEV ELQLQWINIP GSKGL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.