Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47746 | Canola | mitochondrion | 99.4 | 99.4 |
| AT1G73580.1 | Thale cress | mitochondrion | 92.26 | 92.26 |
| Solyc03g118720.2.1 | Tomato | cytosol, mitochondrion | 70.24 | 71.52 |
| Solyc03g118710.2.1 | Tomato | cytosol | 69.64 | 70.91 |
| VIT_17s0000g02290.t01 | Wine grape | cytosol, plastid | 73.81 | 68.51 |
| PGSC0003DMT400074100 | Potato | cytosol | 65.48 | 66.67 |
| CDY51927 | Canola | cytosol | 69.05 | 65.54 |
| CDX77307 | Canola | mitochondrion | 66.07 | 65.29 |
| Solyc06g068940.2.1 | Tomato | cytosol | 63.69 | 64.85 |
| CDY16452 | Canola | mitochondrion | 65.48 | 64.71 |
| CDX75953 | Canola | cytosol | 67.86 | 64.41 |
| Solyc12g040800.1.1 | Tomato | cytosol | 63.1 | 63.86 |
| PGSC0003DMT400037472 | Potato | cytosol | 66.07 | 61.33 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 60.12 | 60.84 |
| CDY38572 | Canola | mitochondrion | 60.71 | 60.71 |
| GSMUA_Achr10P... | Banana | cytosol | 58.33 | 60.49 |
| CDY27005 | Canola | cytosol | 60.12 | 60.12 |
| CDX74561 | Canola | mitochondrion | 60.12 | 60.12 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 61.31 | 59.54 |
| CDY01709 | Canola | mitochondrion | 59.52 | 59.52 |
| CDX74562 | Canola | cytosol | 57.74 | 58.08 |
| CDX99693 | Canola | cytosol | 56.55 | 56.55 |
| CDY11544 | Canola | cytosol | 60.71 | 55.14 |
| CDX96278 | Canola | cytosol | 60.12 | 54.59 |
| EES01097 | Sorghum | cytosol | 53.57 | 54.22 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 54.76 | 54.12 |
| CDY11543 | Canola | cytosol | 52.98 | 53.94 |
| CDX96279 | Canola | cytosol | 52.98 | 53.94 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 54.17 | 53.85 |
| CDY27654 | Canola | cytosol | 57.14 | 53.63 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 54.17 | 53.53 |
| Os02t0327000-01 | Rice | cytosol | 52.38 | 53.33 |
| CDX96152 | Canola | cytosol | 55.36 | 53.14 |
| CDY07499 | Canola | cytosol | 55.36 | 53.14 |
| CDY71433 | Canola | cytosol | 50.6 | 53.12 |
| CDY71117 | Canola | cytosol | 50.6 | 53.12 |
| CDY04742 | Canola | cytosol | 50.6 | 53.12 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 53.57 | 52.94 |
| Zm00001d011396_P001 | Maize | cytosol | 54.76 | 52.27 |
| CDY23479 | Canola | cytosol | 55.95 | 50.81 |
| CDY58016 | Canola | cytosol | 51.19 | 47.78 |
| CDY17665 | Canola | cytosol | 51.19 | 47.78 |
| CDY04090 | Canola | cytosol | 51.19 | 47.78 |
| CDY70365 | Canola | cytosol | 50.6 | 47.22 |
| CDY09436 | Canola | cytosol | 50.0 | 46.67 |
| CDY48816 | Canola | cytosol | 50.0 | 46.67 |
| Zm00001d044179_P001 | Maize | cytosol | 55.36 | 46.27 |
| CDY23477 | Canola | cytosol | 32.74 | 44.0 |
| CDY69110 | Canola | cytosol | 22.02 | 39.36 |
| CDY40545 | Canola | endoplasmic reticulum, extracellular | 44.05 | 37.37 |
| CDY70119 | Canola | cytosol | 55.36 | 36.76 |
| CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 49.4 | 35.17 |
| CDY49631 | Canola | extracellular | 24.4 | 34.17 |
| CDX68329 | Canola | cytosol | 27.38 | 33.33 |
| CDX82807 | Canola | cytosol | 41.67 | 22.15 |
| CDY62002 | Canola | mitochondrion | 42.86 | 21.36 |
| CDY21329 | Canola | mitochondrion | 42.86 | 21.36 |
| CDX76421 | Canola | cytosol | 41.67 | 21.28 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 42.86 | 21.18 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 42.86 | 20.87 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 40.48 | 20.12 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 40.48 | 20.12 |
| CDY65341 | Canola | plastid | 41.67 | 18.87 |
| CDY22145 | Canola | cytosol | 39.88 | 17.49 |
| CDY35974 | Canola | cytosol | 40.48 | 16.75 |
| CDY28007 | Canola | cytosol | 40.48 | 16.75 |
| CDX74022 | Canola | cytosol | 37.5 | 16.41 |
| CDY60369 | Canola | cytosol | 15.48 | 13.98 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 42.26 | 10.07 |
| CDY23476 | Canola | cytosol | 1.19 | 1.69 |
Protein Annotations
| EnsemblPlants:CDX82060 | EnsemblPlantsGene:GSBRNA2T00137078001 | InterPro:C2_dom | InterPro:IPR000008 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF310 |
| PFAM:PF00168 | PFscan:PS50004 | PRINTS:PR00360 | ProteinID:CDX82060 | ProteinID:CDX82060.1 | SEG:seg |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EDF961 | MapMan:11.1.2.1.2 | : | : |
Description
BnaC02g22300D
Coordinates
chrLK031827:-:350597..351397
Molecular Weight (calculated)
19227.2 Da
IEP (calculated)
5.837
GRAVY (calculated)
-0.308
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLMDNLLGI LRVRVKRGVN LAVRDVSSSD PYVVLKLGRQ KLKTKVVKKN VNPQWEEDLT FTVTDPNLPL NLVVYDHDFF SKDDKMGDAE IDLKPYIEAL
101: RMELSGLPDG TIISTIHPNR SNCLAEESYI RWSNDRIVQS FCLRLRNVER GEVELELQWI DLPGSKGL
101: RMELSGLPDG TIISTIHPNR SNCLAEESYI RWSNDRIVQS FCLRLRNVER GEVELELQWI DLPGSKGL
001: MSLMDNLLGI LRVRVQRGVN LAVRDVSSSD PYVVLKLGRQ KLKTKVVKQN VNPQWQEDLS FTVTDPNLPL TLIVYDHDFF SKDDKMGDAE IDLKPYIEAL
101: RMELSGLPDG TIISTIGPSR GNCLAEESYI RWINDRIVQH ICLRLRNVER GEVEIELQWI DLPGSKGL
101: RMELSGLPDG TIISTIGPSR GNCLAEESYI RWINDRIVQH ICLRLRNVER GEVEIELQWI DLPGSKGL
Arabidopsis Description
CAR3Protein C2-DOMAIN ABA-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.