Factsheet for Solyc03g118720.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g118710.2.1	Tomato	cytosol	87.88	87.88
Solyc06g068940.2.1	Tomato	cytosol	81.21	81.21
Solyc12g040800.1.1	Tomato	cytosol	76.97	76.51
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	81.82	74.59
KRH41845	Soybean	cytosol	73.94	73.94
KRH48640	Soybean	cytosol	77.58	72.73
KRH60540	Soybean	cytosol	73.94	70.52
CDX82060	Canola	mitochondrion	71.52	70.24
CDY47746	Canola	mitochondrion	70.91	69.64
CDY51927	Canola	cytosol	74.55	69.49
AT3G17980.1	Thale cress	cytosol	74.55	69.49
CDX77307	Canola	mitochondrion	71.52	69.41
CDY16452	Canola	mitochondrion	71.52	69.41
Bra014145.1-P	Field mustard	mitochondrion	71.52	69.41
Bra008104.1-P	Field mustard	cytosol, mitochondrion	70.3	69.05
Solyc02g063360.2.1	Tomato	cytosol	69.09	68.67
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	68.48	68.48
CDX75953	Canola	cytosol	73.33	68.36
Solyc02g063370.2.1	Tomato	cytosol	68.48	68.07
GSMUA_Achr6P07630_001	Banana	cytosol	67.88	67.47
AT1G73580.1	Thale cress	mitochondrion	68.48	67.26
GSMUA_Achr10P...	Banana	cytosol	65.45	66.67
Bra001693.1-P	Field mustard	cytosol	71.52	66.67
KRH39062	Soybean	cytosol	43.64	66.06
GSMUA_Achr2P15950_001	Banana	cytosol	68.48	65.32
KRH39078	Soybean	endoplasmic reticulum, extracellular	78.18	63.24
AT1G48590.2	Thale cress	cytosol, plasma membrane	73.94	61.0
Os02t0327000-01	Rice	cytosol	60.0	60.0
EES01097	Sorghum	cytosol	60.0	59.64
TraesCS2A01G501300.1	Wheat	mitochondrion	61.21	59.41
HORVU0Hr1G039050.2	Barley	mitochondrion	60.0	58.58
TraesCS2D01G501800.2	Wheat	mitochondrion	58.79	57.06
TraesCS2B01G529400.1	Wheat	mitochondrion	58.79	57.06
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	56.36	55.69
Zm00001d011396_P001	Maize	cytosol	59.39	55.68
Zm00001d044179_P001	Maize	cytosol	60.61	49.75
Solyc04g007800.2.1	Tomato	cytosol	46.67	46.11
Solyc04g015070.2.1	Tomato	cytosol	37.58	36.69
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	44.85	22.36
Solyc08g043140.2.1	Tomato	cytosol	39.39	16.46

Protein Annotations

EnsemblPlants:Solyc03g118720.2.1	EnsemblPlantsGene:Solyc03g118720.2	InterPro:C2_dom	InterPro:IPR000008	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310
PFAM:PF00168	PFscan:PS50004	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002765FBE
UniProt:K4BM21	MapMan:11.1.2.1.2	:	:	:	:

Description

No Description!

Coordinates

chr3:+:67561266..67563924

Molecular Weight (calculated)

18721.8 Da

IEP (calculated)

5.975

GRAVY (calculated)

-0.235

Length

165 amino acids

Sequence
(BLAST)

001: MENLLGLLRV RVKRGINLAV RDVRSSDPYV VVKMAKQKLK TRVVKKDVNP EWNEDLTLSV ADPNLPVMLT VYDHDIFSKD DKMGDAEFDI RPFLEALKMN
101: LSGLPGGTII TRIQPCRSNC LSEESNVVWQ DGQVVQDMCL RLRNVECGEI ELQLQWINLP GSRGL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.