Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068533 | Potato | cytosol | 98.23 | 98.23 |
| VIT_13s0019g00350.t01 | Wine grape | cytosol | 70.38 | 70.2 |
| GSMUA_Achr8P09660_001 | Banana | cytosol, plastid | 59.75 | 68.01 |
| GSMUA_Achr5P16180_001 | Banana | cytosol | 63.04 | 67.85 |
| KRH30029 | Soybean | cytosol | 66.58 | 67.26 |
| KRH20756 | Soybean | cytosol | 61.27 | 65.76 |
| AT3G07940.1 | Thale cress | cytosol | 64.05 | 65.71 |
| Bra040041.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 55.44 | 65.37 |
| KRH13401 | Soybean | cytosol | 60.51 | 64.95 |
| CDY22145 | Canola | cytosol | 61.27 | 63.19 |
| Bra001277.1-P | Field mustard | cytosol | 60.76 | 62.5 |
| CDX74022 | Canola | cytosol | 60.76 | 62.5 |
| CDY35974 | Canola | cytosol | 62.28 | 60.59 |
| Bra029688.1-P | Field mustard | cytosol | 62.03 | 60.34 |
| KRH62915 | Soybean | cytosol | 53.42 | 60.11 |
| CDY28007 | Canola | cytosol | 61.52 | 59.85 |
| TraesCS1B01G251400.1 | Wheat | cytosol | 36.46 | 58.3 |
| Os01t0951100-01 | Rice | cytosol | 54.94 | 56.96 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 51.14 | 53.87 |
| TraesCS1D01G239400.3 | Wheat | cytosol | 51.14 | 53.44 |
| Solyc02g024020.2.1 | Tomato | cytosol, mitochondrion | 44.05 | 52.57 |
| Zm00001d038063_P001 | Maize | nucleus | 50.63 | 51.95 |
| EES18146 | Sorghum | cytosol | 49.11 | 50.39 |
| Os05t0382000-01 | Rice | cytosol | 50.13 | 50.13 |
| HORVU1Hr1G057260.3 | Barley | cytosol | 49.62 | 47.92 |
| TraesCS3B01G548000.1 | Wheat | cytosol | 53.16 | 44.12 |
| Solyc02g091520.2.1 | Tomato | cytosol, mitochondrion | 18.23 | 43.64 |
| HORVU3Hr1G108480.1 | Barley | cytosol | 52.66 | 43.33 |
| TraesCS3D01G494100.1 | Wheat | cytosol | 52.15 | 42.13 |
| Solyc12g040800.1.1 | Tomato | cytosol | 17.47 | 41.57 |
| Solyc04g015070.2.1 | Tomato | cytosol | 17.72 | 41.42 |
| Solyc02g063360.2.1 | Tomato | cytosol | 17.22 | 40.96 |
| Solyc03g118710.2.1 | Tomato | cytosol | 16.96 | 40.61 |
| Solyc06g068940.2.1 | Tomato | cytosol | 16.71 | 40.0 |
| Solyc06g053390.2.1 | Tomato | cytosol, mitochondrion | 16.71 | 39.52 |
| Solyc03g118720.2.1 | Tomato | cytosol, mitochondrion | 16.46 | 39.39 |
| Solyc02g063370.2.1 | Tomato | cytosol | 15.95 | 37.95 |
| Solyc04g007800.2.1 | Tomato | cytosol | 15.95 | 37.72 |
| Zm00001d011855_P002 | Maize | cytosol | 52.15 | 19.6 |
Protein Annotations
| Gene3D:2.60.40.150 | Gene3D:3.30.40.160 | MapMan:35.1 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR000008 | InterPro:IPR001164 | InterPro:IPR035892 |
| InterPro:IPR038508 | UniProt:K4CK73 | PFAM:PF00168 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50004 |
| PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF390 | SMART:SM00105 | SMART:SM00239 | SUPFAM:SSF49562 |
| SUPFAM:SSF57863 | EnsemblPlantsGene:Solyc08g043140.2 | EnsemblPlants:Solyc08g043140.2.1 | UniParc:UPI000276C268 | SEG:seg | : |
Description
Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:Projected from Arabidopsis thaliana (AT3G07940) UniProtKB/Swiss-Prot;Acc:Q8L7A4]
Coordinates
chr8:+:23074556..23079139
Molecular Weight (calculated)
44238.9 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.440
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIHHQGNVD SNNVTGSCLY ELLQMESSAN CSGHQPERRN RSSSPRHRLQ RLLSESGNRF CADCGSPDPK WVSINLGIFI CIKCSGVHRS LGVHISKVLS
101: VKLDEWTDDQ VDSMIEMGGN SAANMKYEAA IPDSYRKPRP EALIEVRTDF IRRKYELQQF LNSDEQMICP YPPSSSSHCN SLSLTCSLAL DKRNYEKQST
201: GHRIHGIGHA FRNSWRRKES EHRSTKKSNS MAGMVEFIGL IKVNVVRGTN LAVRDVVTSD PYVILSLGSQ SVKTRVIKNN LNPVWNEKLM LSIPENVPPL
301: KMLVYDKDTF TTDDFMGEAE IDIQPLVTAA KASENSTLSE SIQLGKWKAS KDNTLVKDGM ISLIDGKVKQ EISVKLQNVE RGVLEIELEC VPLTQ
101: VKLDEWTDDQ VDSMIEMGGN SAANMKYEAA IPDSYRKPRP EALIEVRTDF IRRKYELQQF LNSDEQMICP YPPSSSSHCN SLSLTCSLAL DKRNYEKQST
201: GHRIHGIGHA FRNSWRRKES EHRSTKKSNS MAGMVEFIGL IKVNVVRGTN LAVRDVVTSD PYVILSLGSQ SVKTRVIKNN LNPVWNEKLM LSIPENVPPL
301: KMLVYDKDTF TTDDFMGEAE IDIQPLVTAA KASENSTLSE SIQLGKWKAS KDNTLVKDGM ISLIDGKVKQ EISVKLQNVE RGVLEIELEC VPLTQ
001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
Arabidopsis Description
AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.