Factsheet for Bra001277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74022	Canola	cytosol	99.48	99.48
AT3G07940.1	Thale cress	cytosol	84.38	84.16
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	72.92	83.58
Bra029688.1-P	Field mustard	cytosol	84.38	79.8
KRH30029	Soybean	cytosol	64.84	63.68
KRH20756	Soybean	cytosol	59.38	61.96
KRH13401	Soybean	cytosol	59.11	61.68
PGSC0003DMT400068533	Potato	cytosol	63.02	61.27
Solyc08g043140.2.1	Tomato	cytosol	62.5	60.76
VIT_13s0019g00350.t01	Wine grape	cytosol	61.46	59.6
GSMUA_Achr5P16180_001	Banana	cytosol	56.25	58.86
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	53.12	58.79
KRH62915	Soybean	cytosol	50.0	54.7
TraesCS1B01G251400.1	Wheat	cytosol	34.11	53.04
Os01t0951100-01	Rice	cytosol	52.6	53.02
Bra029572.1-P	Field mustard	cytosol	37.24	51.81
TraesCS1A01G239200.1	Wheat	cytosol	50.0	51.2
EES18146	Sorghum	cytosol	51.04	50.91
TraesCS1D01G239400.3	Wheat	cytosol	50.0	50.79
Zm00001d038063_P001	Maize	nucleus	50.78	50.65
Os05t0382000-01	Rice	cytosol	50.52	49.11
Bra038783.1-P	Field mustard	cytosol	40.36	45.86
HORVU1Hr1G057260.3	Barley	cytosol	48.44	45.48
HORVU3Hr1G108480.1	Barley	cytosol	52.6	42.08
TraesCS3B01G548000.1	Wheat	cytosol	52.08	42.02
TraesCS3D01G494100.1	Wheat	cytosol	51.3	40.29
Bra008104.1-P	Field mustard	cytosol, mitochondrion	16.15	36.9
Bra018410.1-P	Field mustard	mitochondrion	15.89	36.31
Bra014145.1-P	Field mustard	mitochondrion	15.89	35.88
Bra016185.1-P	Field mustard	cytosol	15.36	35.76
Bra016186.1-P	Field mustard	cytosol	17.19	35.68
Bra004161.1-P	Field mustard	cytosol	16.15	35.43
Bra025441.1-P	Field mustard	cytosol	15.36	35.12
Bra013508.1-P	Field mustard	cytosol	35.94	35.11
Bra028147.1-P	Field mustard	cytosol	15.1	34.52
Bra024565.1-P	Field mustard	cytosol	14.06	33.75
Bra017445.1-P	Field mustard	cytosol	15.36	32.78
Bra001693.1-P	Field mustard	cytosol	15.1	32.77
Bra028148.1-P	Field mustard	mitochondrion	14.32	32.74
Bra026650.1-P	Field mustard	cytosol	14.58	31.11
Bra024877.1-P	Field mustard	cytosol	14.32	30.56
Bra024773.1-P	Field mustard	cytosol	22.92	30.34
Bra003941.1-P	Field mustard	cytosol	19.01	28.85
Zm00001d011855_P002	Maize	cytosol	51.04	18.65
Bra003940.1-P	Field mustard	cytosol	5.47	15.0

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.30.40.160	MapMan:35.1	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
EnsemblPlantsGene:Bra001277	EnsemblPlants:Bra001277.1	EnsemblPlants:Bra001277.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	UniProt:M4CAP8	PFAM:PF00168
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390
SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI00025404DD	:

Description

AT3G07940 (E=1e-188) | zinc finger and C2 domain protein, putative

Coordinates

chrA03:+:15615250..15617378

Molecular Weight (calculated)

43015.3 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.454

Length

384 amino acids

Sequence
(BLAST)

001: MSVGQENVYP VEVPGSRACL YDLLCSDTPR WTLQMDLQTS SSSDPRDRLE KLLKQPGNKY CADCGSPKPK WVSLNLGVFI CIKCSGVHRS LGVHISKVLS
101: VKLDEWTDDQ VDMLVGCGGN TVVNQRFEAC NIDQLKKPKP DSNNEERSDF IRKKYELHQF MDPNDSDLCS HQQPSQVNNP PASLCSSSHR SAKNRIGHAL
201: RNSWGRRESD HKGTKKSNSL AGMVEFVGLI KVNVVKGTNL AVRDVMTSDP YVILSLGQQS VKTRVIKNNL NPVWNETLML SIPEQVPPLK VLVYDKDKFT
301: TDDFMGEAEI DIEPLVSAAI EYETSTIRET RRLGSWLACK EDTSVSDGIV SHEEVKVKQD ISLRLQKVER GVLEIQIECL PLTQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.