Factsheet for TraesCS3D01G494100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G548000.1	Wheat	cytosol	93.66	96.22
HORVU3Hr1G108480.1	Barley	cytosol	89.16	90.83
Os01t0951100-01	Rice	cytosol	58.08	74.54
CDY69110	Canola	cytosol	11.66	60.64
GSMUA_Achr5P16180_001	Banana	cytosol	45.19	60.22
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	41.92	59.08
TraesCS1D01G239400.3	Wheat	cytosol	44.58	57.67
KRH30029	Soybean	cytosol	43.76	54.73
KRH13401	Soybean	cytosol	40.7	54.08
AT3G07940.1	Thale cress	cytosol	42.54	54.03
KRH20756	Soybean	cytosol	40.49	53.8
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	36.81	53.73
CDY22145	Canola	cytosol	41.31	52.74
Solyc08g043140.2.1	Tomato	cytosol	42.13	52.15
PGSC0003DMT400068533	Potato	cytosol	41.92	51.9
CDX74022	Canola	cytosol	40.49	51.56
Bra001277.1-P	Field mustard	cytosol	40.29	51.3
VIT_13s0019g00350.t01	Wine grape	cytosol	41.31	51.01
CDY35974	Canola	cytosol	40.7	49.01
CDY28007	Canola	cytosol	40.7	49.01
Bra029688.1-P	Field mustard	cytosol	40.7	49.01
KRH62915	Soybean	cytosol	34.76	48.43
TraesCS2D01G501800.2	Wheat	mitochondrion	14.72	42.35
TraesCS6D01G152000.1	Wheat	cytosol	28.22	40.47
TraesCS6D01G380000.1	Wheat	cytosol, extracellular	13.09	38.32
TraesCS5D01G173700.1	Wheat	cytosol	12.07	34.5
TraesCS2D01G233300.1	Wheat	cytosol	11.25	32.74
TraesCS2D01G262500.1	Wheat	cytosol	10.84	31.18
TraesCS2D01G233200.1	Wheat	endoplasmic reticulum, extracellular	12.07	29.95
TraesCS6D01G265900.2	Wheat	cytosol	26.38	29.45
Zm00001d011855_P002	Maize	cytosol	61.55	28.64

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0008150	GO:GO:0030234
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF312	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	EnsemblPlantsGene:TraesCS3D01G494100	EnsemblPlants:TraesCS3D01G494100.1	TIGR:cd04038
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:586957589..586961478

Molecular Weight (calculated)

53037.4 Da

IEP (calculated)

9.229

GRAVY (calculated)

-0.673

Length

489 amino acids

Sequence
(BLAST)

001: MEGQKHHADS QKHNRRKTST KMGSGGDQAS PPGAKAGAGG DQANQPGAKA GAGGDFPNLP CPPKPGTSGD QATSPGAKLR AGDQASPSST KMRAGDQASP
101: PSTKFRAGDQ ASPPSTKFRA GDQASPPSTK FRAGDQASPP STKMRAGDQA NQPGQIATTD RLDRLLSQPA NKCCADCGAP DPKWVSLTFG AFICIKCSGA
201: HRSLGVHISK IVSVKLDEWT DEQVDFLTDL GGNGAVNSTY EAFLGNYTKP RQDCSADDRN DFIRRKYEFQ QFLSNQQLSC SSQNNGKHCY QQQHGSSNRH
301: GLGHAFRNSW RRKEDKSVKK PAAVEVGMVE FVGLIKVNII RGTNLAIRDV MSSDPYVILN LGHQSMKTKV IKSSLNPVWN GRLLLSIPDP VPLLKVQVYD
401: KDTFTTDDRM GEAEINIQPL VAAARAYETK SITDNAELKN WMAKDGIWIP RDSAITIIDN KVKQEVTVRL QNVERGHLEM ELECVPLTQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.