Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040041.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus | 78.18 | 89.85 |
| CDY22145 | Canola | cytosol | 88.31 | 88.77 |
| CDX74022 | Canola | cytosol | 84.68 | 84.9 |
| Bra001277.1-P | Field mustard | cytosol | 84.16 | 84.38 |
| CDY28007 | Canola | cytosol | 88.83 | 84.24 |
| Bra029688.1-P | Field mustard | cytosol | 88.57 | 83.99 |
| CDY35974 | Canola | cytosol | 88.31 | 83.74 |
| KRH30029 | Soybean | cytosol | 68.05 | 67.01 |
| KRH20756 | Soybean | cytosol | 62.6 | 65.49 |
| KRH13401 | Soybean | cytosol | 62.6 | 65.49 |
| Solyc08g043140.2.1 | Tomato | cytosol | 65.71 | 64.05 |
| PGSC0003DMT400068533 | Potato | cytosol | 65.45 | 63.8 |
| GSMUA_Achr5P16180_001 | Banana | cytosol | 60.26 | 63.22 |
| VIT_13s0019g00350.t01 | Wine grape | cytosol | 64.94 | 63.13 |
| GSMUA_Achr8P09660_001 | Banana | cytosol, plastid | 56.1 | 62.25 |
| KRH62915 | Soybean | cytosol | 52.73 | 57.83 |
| Os01t0951100-01 | Rice | cytosol | 55.32 | 55.91 |
| TraesCS1B01G251400.1 | Wheat | cytosol | 35.58 | 55.47 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 51.69 | 53.07 |
| EES18146 | Sorghum | cytosol | 52.73 | 52.73 |
| TraesCS1D01G239400.3 | Wheat | cytosol | 51.69 | 52.65 |
| Zm00001d038063_P001 | Maize | nucleus | 52.47 | 52.47 |
| Os05t0382000-01 | Rice | cytosol | 53.25 | 51.9 |
| AT4G05330.1 | Thale cress | cytosol, mitochondrion, nucleus | 43.9 | 50.3 |
| AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 43.38 | 49.55 |
| HORVU1Hr1G057260.3 | Barley | cytosol | 49.87 | 46.94 |
| HORVU3Hr1G108480.1 | Barley | cytosol | 55.06 | 44.17 |
| TraesCS3B01G548000.1 | Wheat | cytosol | 54.55 | 44.12 |
| AT1G73580.1 | Thale cress | mitochondrion | 18.7 | 42.86 |
| TraesCS3D01G494100.1 | Wheat | cytosol | 54.03 | 42.54 |
| AT1G70800.1 | Thale cress | cytosol | 18.18 | 40.23 |
| AT1G70810.1 | Thale cress | cytosol | 17.14 | 40.0 |
| AT1G66360.1 | Thale cress | cytosol | 17.66 | 39.08 |
| AT3G17980.1 | Thale cress | cytosol | 17.4 | 37.85 |
| AT5G37740.2 | Thale cress | cytosol | 17.4 | 37.64 |
| AT5G47710.1 | Thale cress | cytosol | 16.1 | 37.35 |
| AT1G70790.1 | Thale cress | cytosol | 17.92 | 37.3 |
| AT1G23140.1 | Thale cress | cytosol, mitochondrion | 15.84 | 36.97 |
| AT2G01540.1 | Thale cress | cytosol | 16.88 | 36.11 |
| AT1G48590.2 | Thale cress | cytosol, plasma membrane | 18.18 | 35.0 |
| Zm00001d011855_P002 | Maize | cytosol | 52.99 | 19.41 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:22.3.4.3 | Gene3D:3.30.40.160 | EntrezGene:819985 | UniProt:A0A178VKS3 | ProteinID:AAF21204.1 |
| ProteinID:AEE74623.1 | InterPro:ARFGAP/RecO | ArrayExpress:AT3G07940 | EnsemblPlantsGene:AT3G07940 | RefSeq:AT3G07940 | TAIR:AT3G07940 |
| RefSeq:AT3G07940-TAIR-G | EnsemblPlants:AT3G07940.1 | TAIR:AT3G07940.1 | EMBL:AY136381 | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| EMBL:BT002109 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR000008 | InterPro:IPR001164 |
| InterPro:IPR035892 | InterPro:IPR038508 | RefSeq:NP_187451.2 | ProteinID:OAP06967.1 | PFAM:PF00168 | PFAM:PF01412 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00405 | PFscan:PS50004 | PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF390 | UniProt:Q8L7A4 |
| SMART:SM00105 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF57863 | UniParc:UPI00000AC44F | : |
Description
AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
Coordinates
chr3:+:2528997..2531573
Molecular Weight (calculated)
42914.2 Da
IEP (calculated)
6.186
GRAVY (calculated)
-0.458
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.