Factsheet for TraesCS1B01G251400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G239400.3	Wheat	cytosol	97.98	64.02
TraesCS1A01G239200.1	Wheat	cytosol	96.36	63.47
CDY69110	Canola	cytosol	22.67	59.57
HORVU1Hr1G057260.3	Barley	cytosol	91.5	55.26
Zm00001d038063_P001	Maize	nucleus	71.66	45.97
EES18146	Sorghum	cytosol	71.66	45.97
Os05t0382000-01	Rice	cytosol	72.47	45.32
TraesCS6B01G434600.1	Wheat	extracellular	28.34	41.92
TraesCS2B01G529400.1	Wheat	mitochondrion	28.74	41.76
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	57.49	40.92
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	55.47	40.9
GSMUA_Achr5P16180_001	Banana	cytosol	60.73	40.87
TraesCS2B01G280800.1	Wheat	cytosol	26.72	38.82
KRH62915	Soybean	cytosol	53.85	37.89
KRH20756	Soybean	cytosol	55.87	37.5
KRH30029	Soybean	cytosol	59.11	37.34
KRH13401	Soybean	cytosol	55.47	37.23
Solyc08g043140.2.1	Tomato	cytosol	58.3	36.46
VIT_13s0019g00350.t01	Wine grape	cytosol	57.89	36.11
PGSC0003DMT400068533	Potato	cytosol	57.49	35.95
TraesCS2B01G250600.1	Wheat	extracellular, vacuole	21.05	35.86
CDY22145	Canola	cytosol	55.47	35.77
TraesCS4B01G380100.1	Wheat	cytosol	24.29	35.71
TraesCS5B01G166000.1	Wheat	cytosol	24.7	35.67
AT3G07940.1	Thale cress	cytosol	55.47	35.58
Bra001277.1-P	Field mustard	cytosol	53.04	34.11
CDX74022	Canola	cytosol	53.04	34.11
CDY28007	Canola	cytosol	55.06	33.5
TraesCS2B01G250500.2	Wheat	cytosol	22.67	33.33
Bra029688.1-P	Field mustard	cytosol	54.66	33.25
CDY35974	Canola	cytosol	54.66	33.25
TraesCS3B01G548000.1	Wheat	cytosol	61.54	31.93
TraesCS6B01G190600.1	Wheat	cytosol	39.68	30.34
TraesCS6B01G314300.1	Wheat	cytosol	35.63	19.69

Protein Annotations

EnsemblPlants:TraesCS1B01G251400.1	EnsemblPlantsGene:TraesCS1B01G251400	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390	PFAM:PF00168	PFscan:PS50004	SMART:SM00239
SUPFAM:SSF49562	TIGR:cd04038	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1B:+:444002012..444003534

Molecular Weight (calculated)

28168.1 Da

IEP (calculated)

7.635

GRAVY (calculated)

-0.396

Length

247 amino acids

Sequence
(BLAST)

001: MKLLSENYKK PRQDFATEDR AIFIRKKYEL QQFVTNPQFA CPLHKHGAEK RHNQQHSGSK HGTFRNSWRK KESENKGVKK MMDVGMVEFV GLIKVDIIRG
101: TDLAVRDVMS SDPYVMIILG HQSMKTKVIK NTLNPIWNER LMLSIPDPVP PLKVLVFDKD TFTSDDRMGE AEVDIQPLIS AAREYQSSII TESTQICTFL
201: ASENSILAKD SIISIVDGKV EQEIALRLQN VEHGELEIKL ECVPLSQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.