Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001277.1-P Field mustard cytosol 99.48 99.48
AT3G07940.1 Thale cress cytosol 84.9 84.68
CDY22145 Canola cytosol 83.33 83.55
CDY35974 Canola cytosol 84.64 80.05
CDY28007 Canola cytosol 84.11 79.56
CDY69110 Canola cytosol 18.75 76.6
KRH30029 Soybean cytosol 64.84 63.68
KRH20756 Soybean cytosol 59.11 61.68
KRH13401 Soybean cytosol 58.85 61.41
PGSC0003DMT400068533 Potato cytosol 63.02 61.27
Solyc08g043140.2.1 Tomato cytosol 62.5 60.76
VIT_13s0019g00350.t01 Wine grape cytosol 61.2 59.34
GSMUA_Achr8P09660_001 Banana cytosol, plastid 52.86 58.5
GSMUA_Achr5P16180_001 Banana cytosol 55.73 58.31
KRH62915 Soybean cytosol 49.74 54.42
Os01t0951100-01 Rice cytosol 52.86 53.28
TraesCS1B01G251400.1 Wheat cytosol 34.11 53.04
TraesCS1A01G239200.1 Wheat cytosol 50.0 51.2
EES18146 Sorghum cytosol 51.3 51.17
Zm00001d038063_P001 Maize nucleus 51.04 50.91
TraesCS1D01G239400.3 Wheat cytosol 50.0 50.79
Os05t0382000-01 Rice cytosol 50.52 49.11
CDX82807 Canola cytosol 40.1 48.73
CDX76421 Canola cytosol 40.62 47.42
CDY21329 Canola mitochondrion 41.41 47.18
CDY62002 Canola mitochondrion 41.15 46.88
CDX94026 Canola cytosol, mitochondrion, nucleus 40.89 46.45
CDY46364 Canola cytosol, mitochondrion, nucleus 41.41 46.09
CDY58481 Canola cytosol, mitochondrion, nucleus 40.36 45.86
CDY39164 Canola cytosol, mitochondrion, nucleus 40.36 45.59
HORVU1Hr1G057260.3 Barley cytosol 48.44 45.48
CDY65341 Canola plastid 41.15 42.59
HORVU3Hr1G108480.1 Barley cytosol 52.86 42.29
TraesCS3B01G548000.1 Wheat cytosol 52.34 42.23
TraesCS3D01G494100.1 Wheat cytosol 51.56 40.49
CDY47746 Canola mitochondrion 16.41 37.5
CDX82060 Canola mitochondrion 16.41 37.5
CDY38572 Canola mitochondrion 15.89 36.31
CDY27005 Canola cytosol 15.89 36.31
CDY11544 Canola cytosol 17.45 36.22
CDY16452 Canola mitochondrion 15.89 35.88
CDX96279 Canola cytosol 15.36 35.76
CDY11543 Canola cytosol 15.36 35.76
CDY01709 Canola mitochondrion 15.62 35.71
CDX96278 Canola cytosol 17.19 35.68
CDX77307 Canola mitochondrion 15.62 35.29
CDY23479 Canola cytosol 16.93 35.14
CDY71117 Canola cytosol 14.58 35.0
CDX96152 Canola cytosol 15.89 34.86
CDY07499 Canola cytosol 15.89 34.86
CDX99693 Canola cytosol 15.1 34.52
CDY51927 Canola cytosol 15.62 33.9
CDX75953 Canola cytosol 15.62 33.9
CDY71433 Canola cytosol 14.06 33.75
CDY04742 Canola cytosol 14.06 33.75
CDX74562 Canola cytosol 14.58 33.53
CDY70365 Canola cytosol 15.62 33.33
CDY27654 Canola cytosol 15.36 32.96
CDY04090 Canola cytosol 15.36 32.78
CDX74561 Canola mitochondrion 14.32 32.74
CDY09436 Canola cytosol 14.58 31.11
CDY48816 Canola cytosol 14.58 31.11
CDY58016 Canola cytosol 14.32 30.56
CDY17665 Canola cytosol 14.06 30.0
CDY40545 Canola endoplasmic reticulum, extracellular 15.36 29.8
CDY70119 Canola cytosol 18.75 28.46
CDY60369 Canola cytosol 12.5 25.81
CDX79040 Canola cytosol, mitochondrion, nucleus, plastid 40.1 21.84
CDY23477 Canola cytosol 7.03 21.6
CDY49631 Canola extracellular 6.25 20.0
Zm00001d011855_P002 Maize cytosol 51.3 18.74
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 11.46 18.64
CDX68329 Canola cytosol 5.47 15.22
CDY23476 Canola cytosol 0.52 1.69
Protein Annotations
Gene3D:2.60.40.150MapMan:22.3.4.3Gene3D:3.30.40.160GO:A0A078CB27InterPro:ARFGAP/RecOInterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sfInterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX74022ProteinID:CDX74022ProteinID:CDX74022.1
GO:GO:0003674GO:GO:0005096GO:GO:0008150GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00111759001InterPro:IPR000008
InterPro:IPR001164InterPro:IPR035892InterPro:IPR038508PFAM:PF00168PFAM:PF01412PRINTS:PR00405
PFscan:PS50004PFscan:PS50115PANTHER:PTHR23180PANTHER:PTHR23180:SF390SMART:SM00105SMART:SM00239
SUPFAM:SSF49562SUPFAM:SSF57863UniParc:UPI0004EECC0A:::
Description
BnaA03g30250D
Coordinates
chrLK031800:-:973811..975930
Molecular Weight (calculated)
43056.4 Da
IEP (calculated)
6.905
GRAVY (calculated)
-0.462
Length
384 amino acids
Sequence
(BLAST)
001: MSVGQENVYP VEVPGSRACL YDLLCSDTPR WTLQMDLQTS SSSDPRDRLE KLLKQPGNKY CADCGSPKPK WVSLNLGVFI CIKCSGVHRS LGVHISKVLS
101: VKLDEWTDDQ VDMLVGCGGN TVVNQRFEAC NIDQLKKPKP DSNNEERNDF IRKKYELHQF MDPKDSDLCS HQQPSQVNNP PASLCSSSHR SAKNRIGHAL
201: RNSWGRRESD HKGTKKSNSL AGMVEFVGLI KVNVVKGTNL AVRDVMTSDP YVILSLGQQS VKTRVIKNNL NPVWNETLML SIPEQVPPLK VLVYDKDKFT
301: TDDFMGEAEI DIEPLVSAAI EYETSTIRET RRLGSWLACK EDTSVSDGIV SHEEVKVKQD ISLRLQKVER GVLEIQIECL PLTQ
Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)
001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ
Arabidopsis Description
AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.