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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82807 Canola cytosol 84.5 87.97
AT4G21160.4 Thale cress cytosol, mitochondrion, nucleus 89.97 87.83
CDY65341 Canola plastid 98.78 87.6
CDY58481 Canola cytosol, mitochondrion, nucleus 88.75 86.39
CDX94026 Canola cytosol, mitochondrion, nucleus 87.84 85.5
CDY62002 Canola mitochondrion 82.98 81.01
CDY21329 Canola mitochondrion 82.67 80.71
CDY46364 Canola cytosol, mitochondrion, nucleus 84.19 80.29
CDY39164 Canola cytosol, mitochondrion, nucleus 82.67 80.0
Solyc02g024020.2.1 Tomato cytosol, mitochondrion 74.16 73.72
VIT_10s0003g04900.t01 Wine grape cytosol 73.56 73.33
Os06t0609450-01 Rice cytosol 27.96 66.67
EER88634 Sorghum cytosol 62.92 62.54
Os02t0198300-02 Rice plasma membrane 60.79 62.5
KRH71995 Soybean cytosol 20.67 62.39
KXG29722 Sorghum cytosol 58.97 61.98
EES05611 Sorghum cytosol 62.01 61.45
HORVU6Hr1G032940.1 Barley cytosol 60.18 61.3
TraesCS6A01G285400.2 Wheat golgi 61.7 61.14
TraesCS6A01G160700.1 Wheat cytosol 59.88 60.99
TraesCS6B01G190600.1 Wheat cytosol 59.88 60.99
Os02t0722500-01 Rice cytosol 60.18 59.64
TraesCS6D01G152000.1 Wheat cytosol 59.57 57.48
Zm00001d034981_P001 Maize cytosol 33.13 57.07
GSMUA_Achr7P20210_001 Banana cytosol 37.69 55.11
CDY69110 Canola cytosol 14.89 52.13
TraesCS6D01G265900.2 Wheat cytosol 61.7 46.35
HORVU6Hr1G071850.3 Barley mitochondrion 61.7 46.03
CDY60369 Canola cytosol 25.53 45.16
TraesCS6B01G314300.1 Wheat cytosol 59.27 43.62
CDY22145 Canola cytosol 50.46 43.34
CDY01709 Canola mitochondrion 21.58 42.26
CDX74561 Canola mitochondrion 21.28 41.67
CDX82060 Canola mitochondrion 21.28 41.67
CDY47746 Canola mitochondrion 21.28 41.67
CDX74562 Canola cytosol 20.97 41.32
CDX74022 Canola cytosol 47.42 40.62
CDY71117 Canola cytosol 19.45 40.0
CDY35974 Canola cytosol 49.24 39.9
CDY28007 Canola cytosol 49.24 39.9
CDY38572 Canola mitochondrion 20.36 39.88
CDY27005 Canola cytosol 20.36 39.88
CDX99693 Canola cytosol 20.36 39.88
CDX79040 Canola cytosol, mitochondrion, nucleus, plastid 84.5 39.43
CDX77307 Canola mitochondrion 20.36 39.41
CDY11543 Canola cytosol 19.76 39.39
CDX96279 Canola cytosol 19.76 39.39
CDY04742 Canola cytosol 19.15 39.38
CDY71433 Canola cytosol 19.15 39.38
Zm00001d005398_P001 Maize cytosol 42.86 39.17
CDY27654 Canola cytosol 21.28 39.11
CDY11544 Canola cytosol 21.88 38.92
CDY16452 Canola mitochondrion 20.06 38.82
CDX96278 Canola cytosol 21.58 38.38
CDX96152 Canola cytosol 20.36 38.29
CDY07499 Canola cytosol 20.36 38.29
CDY51927 Canola cytosol 20.36 37.85
CDX75953 Canola cytosol 20.06 37.29
CDY70365 Canola cytosol 20.36 37.22
CDY04090 Canola cytosol 20.36 37.22
CDY58016 Canola cytosol 20.36 37.22
CDY17665 Canola cytosol 20.06 36.67
CDY48816 Canola cytosol 19.76 36.11
CDY09436 Canola cytosol 19.76 36.11
CDY23479 Canola cytosol 20.06 35.68
CDY40545 Canola endoplasmic reticulum, extracellular 21.28 35.35
Zm00001d007340_P001 Maize cytosol 39.82 35.31
CDY49631 Canola extracellular 10.94 30.0
CDY70119 Canola cytosol 22.49 29.25
CDY23477 Canola cytosol 9.73 25.6
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 17.02 23.73
CDX68329 Canola cytosol 7.6 18.12
CDY23476 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:2.60.40.150MapMan:22.3.4.3Gene3D:3.30.40.160GO:A0A078CGS6InterPro:ARFGAP/RecOInterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sfInterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX76421ProteinID:CDX76421ProteinID:CDX76421.1
GO:GO:0003674GO:GO:0005096GO:GO:0008150GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00126825001InterPro:IPR000008
InterPro:IPR001164InterPro:IPR035892InterPro:IPR038508PFAM:PF00168PFAM:PF01412PRINTS:PR00405
PFscan:PS50004PFscan:PS50115PANTHER:PTHR23180PANTHER:PTHR23180:SF245SMART:SM00105SMART:SM00239
SUPFAM:SSF49562SUPFAM:SSF57863UniParc:UPI0004EEFCE0SEG:seg::
Description
BnaA08g09790D
Coordinates
chrLK031807:+:1064704..1067225
Molecular Weight (calculated)
36410.1 Da
IEP (calculated)
4.679
GRAVY (calculated)
-0.317
Length
329 amino acids
Sequence
(BLAST)
001: MSHSAASSGK RRIRDLLTQS DNRVCADCGA PDPKWASANI GVFICLKCCG VHRSLGTHVS KVLSVTLDEW SDEEVDSMIE IGGNASANSI YEAFIPDGSS
101: KPRTDASHDH RMRFIRSKYE FQEFLKPSLR ITSGKTSSSS YRSSSLSSNI IDSFRTTSSS QKPQLEGMVE FIGSLKVTLK KGTNLAIRDM MTSDPYVVLT
201: LGQQTAQSTV MKSNLNPVWN EELMLSVPHD YGSVKLQVFD YDTFSADDIM GEAEIDIQPL ITSAMAFGDP EMFGDMQIGK WLKSNDNALI EDSIINIADG
301: KVKQEVQIKL QNVESGELEL ELEWLPLEQ
Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)
001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ
Arabidopsis Description
AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.