Factsheet for GSMUA_Achr7P20210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034981_P001	Maize	cytosol	51.11	60.21
KRH71995	Soybean	cytosol	26.67	55.05
GSMUA_Achr9P12760_001	Banana	cytosol	64.89	44.38
GSMUA_Achr9P22350_001	Banana	cytosol	64.89	43.84
GSMUA_Achr9P27900_001	Banana	cytosol	67.11	43.52
GSMUA_Achr4P03900_001	Banana	cytosol	63.11	42.9
VIT_10s0003g04900.t01	Wine grape	cytosol	61.78	42.12
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	59.11	40.18
KRH11784	Soybean	cytosol	57.78	40.12
KRH36796	Soybean	cytosol	57.33	39.81
KRH59111	Soybean	cytosol	56.44	38.72
CDX82807	Canola	cytosol	53.33	37.97
CDX76421	Canola	cytosol	55.11	37.69
CDX94026	Canola	cytosol, mitochondrion, nucleus	56.0	37.28
CDY58481	Canola	cytosol, mitochondrion, nucleus	56.0	37.28
Bra038783.1-P	Field mustard	cytosol	56.0	37.28
KRH42994	Soybean	cytosol	54.22	37.2
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	54.67	36.5
CDY21329	Canola	mitochondrion	54.67	36.5
CDY62002	Canola	mitochondrion	54.67	36.5
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	54.22	36.31
Bra029572.1-P	Field mustard	cytosol	44.0	35.87
Zm00001d005398_P001	Maize	cytosol	56.89	35.56
CDY46364	Canola	cytosol, mitochondrion, nucleus	54.22	35.36
CDY39164	Canola	cytosol, mitochondrion, nucleus	52.0	34.41
Zm00001d007340_P001	Maize	cytosol	55.11	33.42
CDY65341	Canola	plastid	55.11	33.42
CDY60369	Canola	cytosol	25.78	31.18
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	44.0	28.53
GSMUA_Achr5P16180_001	Banana	cytosol	44.89	27.52
Bra013508.1-P	Field mustard	cytosol	46.22	26.46
Bra024773.1-P	Field mustard	cytosol	33.78	26.21
GSMUA_Achr10P...	Banana	cytosol	12.89	17.9
GSMUA_Achr10P...	Banana	cytosol	12.89	17.58
GSMUA_Achr2P15950_001	Banana	cytosol	12.89	16.76
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	52.44	16.74
GSMUA_Achr9P25020_001	Banana	cytosol	12.0	16.36
GSMUA_Achr8P15780_001	Banana	mitochondrion	12.0	16.36
GSMUA_Achr6P07630_001	Banana	cytosol	12.0	16.27
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	11.56	15.76
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	11.56	15.76
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	12.0	14.75
GSMUA_Achr4P13040_001	Banana	cytosol	11.11	14.62
GSMUA_Achr2P05420_001	Banana	cytosol	3.11	4.64

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G20210_001	EnsemblPlants:GSMUA_Achr7P20210_001	EnsemblPlants:GSMUA_Achr7T20210_001	InterPro:IPR001164
InterPro:IPR035892	InterPro:IPR038508	UniProt:M0TJ58	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF291	SMART:SM00105	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000296985E

Description

ADP-ribosylation factor GTPase-activating protein AGD12 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20210_001]

Coordinates

chr7:+:23157704..23164694

Molecular Weight (calculated)

25544.4 Da

IEP (calculated)

9.082

GRAVY (calculated)

-0.521

Length

225 amino acids

Sequence
(BLAST)

001: MRKLKELMLK SDNRICADCG AQDPKWASAN IGVFICLKCS DIHRSLGTDI SKVLSVTLDE WSDADIESMI EVGGNSYANS IYEAFLPKRF PKPKSNSSYE
101: ERSKFIRSKY ESQEFLKPSL RIVSSKMSFN YVEPKESLNY RIDSNNSNKA VEMREFIGDL KVKVVRGSNL AVRDMFSSDP YVVLTLGEQA KGPDNSKTER
201: LKSNMERRAY AVSSSNIWRF ETASI

Best Arabidopsis Sequence Match ( AT4G05330.3 )
(BLAST)

001: MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL
101: PDTCSKPGPD VNHDQRMRFI RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG LLKVTIKKGT NLAIRDMMSS
201: DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS
301: IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.