CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59111	Soybean	cytosol	93.6	93.6
KRH71995	Soybean	cytosol	26.52	79.82
KRH36796	Soybean	cytosol	76.52	77.47
KRH11784	Soybean	cytosol	76.52	77.47
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	74.09	73.41
VIT_10s0003g04900.t01	Wine grape	cytosol	71.04	70.61
Os06t0609450-01	Rice	cytosol	26.83	63.77
EER88634	Sorghum	cytosol	62.5	61.93
TraesCS6A01G160700.1	Wheat	cytosol	60.06	60.99
HORVU6Hr1G032940.1	Barley	cytosol	60.06	60.99
Os02t0198300-02	Rice	plasma membrane	59.45	60.94
KXG29722	Sorghum	cytosol	57.93	60.7
TraesCS6B01G190600.1	Wheat	cytosol	59.45	60.37
TraesCS6A01G285400.2	Wheat	golgi	59.15	58.43
EES05611	Sorghum	cytosol	59.15	58.43
TraesCS6D01G152000.1	Wheat	cytosol	59.45	57.18
Os02t0722500-01	Rice	cytosol	55.49	54.82
KRH25661	Soybean	cytosol	10.98	54.55
Zm00001d034981_P001	Maize	cytosol	31.71	54.45
GSMUA_Achr7P20210_001	Banana	cytosol	37.2	54.22
TraesCS6D01G265900.2	Wheat	cytosol	59.15	44.29
HORVU6Hr1G071850.3	Barley	mitochondrion	59.15	43.99
KRH36617	Soybean	cytosol	22.26	43.98
KRH20756	Soybean	cytosol	48.78	43.48
KRH11612	Soybean	cytosol	21.95	43.37
KRH13401	Soybean	cytosol	48.48	43.21
KRH51202	Soybean	cytosol	21.34	42.17
KRH30029	Soybean	cytosol	49.7	41.69
TraesCS6B01G314300.1	Wheat	cytosol	56.71	41.61
KRG97928	Soybean	cytosol	20.43	40.61
KRG89347	Soybean	cytosol	8.23	40.3
KRH30951	Soybean	cytosol	19.82	39.39
KRG94243	Soybean	cytosol, mitochondrion	20.43	38.51
KRG94240	Soybean	cytosol	19.82	38.46
KRH48640	Soybean	cytosol	20.43	38.07
KRH62915	Soybean	cytosol	39.94	37.32
KRH38191	Soybean	cytosol	20.43	37.22
KRH41845	Soybean	cytosol	18.6	36.97
Zm00001d005398_P001	Maize	cytosol	40.24	36.67
KRH50393	Soybean	cytosol	18.9	36.47
KRH60540	Soybean	cytosol	17.99	34.1
Zm00001d007340_P001	Maize	cytosol	38.41	33.96
KRH39062	Soybean	cytosol	11.28	33.95
KRH39078	Soybean	endoplasmic reticulum, extracellular	20.43	32.84

Protein Annotations

EntrezGene:100806567	Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	EMBL:ACUP02004841	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_08G124000	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	UniProt:K7L688	ProteinID:KRH42993.1
EnsemblPlants:KRH42994	ProteinID:KRH42994	ProteinID:KRH42994.1	PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	SMART:SM00105	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000294B00F	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:9518493..9524305

Molecular Weight (calculated)

36768.2 Da

IEP (calculated)

4.649

GRAVY (calculated)

-0.209

Length

328 amino acids

Sequence
(BLAST)

001: MNNQRLEFGR PVSSKRRLQD LLLQKDNRFC ADCNAPDPKW ASANIGVFVC LKCCGVHRSL GSQISKVLSV TLDEWSSDEI DAMIEVGGNS SANSIYEAYF
101: PEGFTKPGPD ATHDQRVKFI RLKYEHQEFL QPSLRIVSGK SNPPKSISKG IMDSFRITSD SQHMEGMVEF IGMLKVKVIK GTDLAIRDMM TSDPYVILKL
201: GQQTVQTTVI KSNLNPVWNE ELMLSVPQQF GILNLNVFDY DLFSADDIMG EADIDLQPLI TSAIAYGDAR MFDDMQIGKW LKSNGNALID DSIVNIVDGK
301: VKQVISLKLQ NVESGELDLE LEWMPLDY

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.