Factsheet for Os02t0722500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017881_P001	Maize	cytosol	87.35	87.35
EES05611	Sorghum	cytosol	87.05	87.05
TraesCS6A01G285400.2	Wheat	golgi	81.02	81.02
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	76.51	74.71
Os06t0609450-01	Rice	cytosol	29.22	70.29
GSMUA_Achr9P12760_001	Banana	cytosol	66.57	67.17
Bra029572.1-P	Field mustard	cytosol	53.31	64.13
GSMUA_Achr9P27900_001	Banana	cytosol	66.87	63.98
TraesCS6D01G265900.2	Wheat	cytosol	81.33	61.64
Os02t0198300-02	Rice	plasma membrane	59.04	61.25
HORVU6Hr1G071850.3	Barley	mitochondrion	81.02	61.0
VIT_10s0003g04900.t01	Wine grape	cytosol	60.54	60.91
CDX76421	Canola	cytosol	59.64	60.18
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	59.64	59.82
CDX82807	Canola	cytosol	56.93	59.81
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	59.64	58.75
KRH11784	Soybean	cytosol	57.23	58.64
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	59.04	58.33
KRH36796	Soybean	cytosol	56.93	58.33
TraesCS6B01G314300.1	Wheat	cytosol	78.31	58.17
CDX94026	Canola	cytosol, mitochondrion, nucleus	59.04	57.99
CDY21329	Canola	mitochondrion	58.73	57.86
CDY62002	Canola	mitochondrion	58.73	57.86
CDY46364	Canola	cytosol, mitochondrion, nucleus	59.64	57.39
CDY39164	Canola	cytosol, mitochondrion, nucleus	58.73	57.35
Bra038783.1-P	Field mustard	cytosol	57.83	56.8
CDY58481	Canola	cytosol, mitochondrion, nucleus	57.83	56.8
KRH59111	Soybean	cytosol	55.72	56.4
KRH71995	Soybean	cytosol	18.37	55.96
KRH42994	Soybean	cytosol	54.82	55.49
CDY65341	Canola	plastid	59.64	53.37
Bra013508.1-P	Field mustard	cytosol	54.82	46.31
Os07t0108400-01	Rice	cytosol	22.29	42.53
Os02t0327000-01	Rice	cytosol	20.48	41.21
Bra024773.1-P	Field mustard	cytosol	35.54	40.69
Os07t0500300-01	Rice	extracellular	20.78	39.88
Os01t0951100-01	Rice	cytosol	43.37	37.8
Os07t0462500-00	Rice	cytosol	20.48	36.76
Os09t0251800-01	Rice	cytosol, plasma membrane	18.67	36.26
Os05t0382000-01	Rice	cytosol	41.87	35.19
Os07t0501700-01	Rice	cytosol, mitochondrion	17.47	34.94
CDY60369	Canola	cytosol	17.47	31.18
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	56.63	26.67
Os07t0108500-01	Rice	mitochondrion	6.33	11.48

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	EntrezGene:4330565	EMBL:AK066163	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	ProteinID:BAD13017.1	ProteinID:BAF09881.1	ProteinID:BAS80667.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	EMBL:HQ324804	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892
InterPro:IPR038508	EnsemblPlantsGene:Os02g0722500	EnsemblPlants:Os02t0722500-01	PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF291	UniProt:Q6Z653	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI00003503EE	RefSeq:XP_015626849.1	SEG:seg

Description

Arf GTPase activating protein family protein. (Os02t0722500-01)

Coordinates

chr2:-:29998326..30002783

Molecular Weight (calculated)

36845.0 Da

IEP (calculated)

5.677

GRAVY (calculated)

-0.328

Length

332 amino acids

Sequence
(BLAST)

001: MSTTNHYQHI KSNKPVLGKA RKLKDLMLKS DNRICADCGA PDPKWASANI GVFLCLKCGD VHRALGPDVS KVLSVTLDDW SDSDIDSMLE IGGNSYANSI
101: YESFLPKDHP KPKMDSTMEY RTKFIRAKYE TQDFLKPSLR ITSKGSFDAT NAVKSVTSSI SSASGKHVAD DTREFVGELN ITVVRGIQLA VRDMLTSDPY
201: VVLTLGEQKA QTTVKPSDLN PVWNEVLKIS IPRNYGPLKL EVYDHDTFSA DDIMGEAEID LQPMITAVMA FGDPSRVGDM QIGRWFMTKD NALVKDSTVN
301: VVSGKVKQEV HLKLQNVESG EMELELEWVP IP

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.