Factsheet for HORVU6Hr1G071850.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G285400.2	Wheat	golgi	72.11	95.78
TraesCS6D01G265900.2	Wheat	cytosol	87.76	88.36
EES05611	Sorghum	cytosol	62.59	83.13
Zm00001d017881_P001	Maize	cytosol	62.59	83.13
Os02t0722500-01	Rice	cytosol	61.0	81.02
TraesCS6B01G314300.1	Wheat	cytosol	80.73	79.64
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	55.33	71.76
GSMUA_Achr9P12760_001	Banana	cytosol	49.66	66.57
Bra029572.1-P	Field mustard	cytosol	41.04	65.58
GSMUA_Achr9P27900_001	Banana	cytosol	50.79	64.55
VIT_10s0003g04900.t01	Wine grape	cytosol	47.39	63.33
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	47.39	63.14
CDX82807	Canola	cytosol	44.44	62.03
KRH11784	Soybean	cytosol	45.35	61.73
CDX76421	Canola	cytosol	46.03	61.7
KRH36796	Soybean	cytosol	45.12	61.42
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	46.26	60.53
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	46.03	60.42
CDY62002	Canola	mitochondrion	46.03	60.24
CDY21329	Canola	mitochondrion	46.03	60.24
KRH59111	Soybean	cytosol	44.44	59.76
CDX94026	Canola	cytosol, mitochondrion, nucleus	45.35	59.17
KRH42994	Soybean	cytosol	43.99	59.15
CDY46364	Canola	cytosol, mitochondrion, nucleus	46.26	59.13
CDY39164	Canola	cytosol, mitochondrion, nucleus	45.35	58.82
HORVU6Hr1G032940.1	Barley	cytosol	43.08	58.82
Bra038783.1-P	Field mustard	cytosol	44.67	58.28
CDY58481	Canola	cytosol, mitochondrion, nucleus	44.67	58.28
KRH71995	Soybean	cytosol	14.29	57.8
CDY65341	Canola	plastid	46.49	55.26
Bra013508.1-P	Field mustard	cytosol	41.5	46.56
Bra024773.1-P	Field mustard	cytosol	27.66	42.07
HORVU0Hr1G039050.2	Barley	mitochondrion	15.65	40.83
HORVU6Hr1G091440.1	Barley	cytosol, endoplasmic reticulum	15.19	40.36
HORVU6Hr1G091350.3	Barley	cytosol, endoplasmic reticulum	15.19	40.36
HORVU2Hr1G063790.1	Barley	cytosol	14.29	37.06
CDY60369	Canola	cytosol	13.83	32.8
HORVU1Hr1G057260.3	Barley	cytosol	29.71	32.03
HORVU5Hr1G052010.2	Barley	cytosol	14.74	28.76
HORVU5Hr1G052030.1	Barley	cytosol	14.97	27.5
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	43.76	27.38
HORVU3Hr1G108480.1	Barley	cytosol	29.71	27.29
HORVU2Hr1G048940.1	Barley	cytosol, plastid	6.58	21.17

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	UniProt:A0A287UM02	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:HORVU6Hr1G071850	EnsemblPlants:HORVU6Hr1G071850.3
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF291	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000B483BEB	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:-:499049297..499054715

Molecular Weight (calculated)

49375.6 Da

IEP (calculated)

9.409

GRAVY (calculated)

-0.607

Length

441 amino acids

Sequence
(BLAST)

001: QQAPVGMAMA HGRPGRPRMT KLAEIYHWES NNSTGSPHHP QPTWFPPRRR ASFARPQPAS QRDEAGGRSL HRRRRHRPPR SRRRYPPTPP SAGAEIFFVV
101: VSYPRFASNM SSANRHQPIK LTKPVVGKAR KLKDLMLKSD NRVCADCSAP DPKWASSNIG VFLCLKCGDV HRALGPDISN VLSLTLDDWS DSDIDSMVEV
201: GGNSYANSIY EAFLPKDHPK PRPDAPMEYR TKFIRAKYET QDFLKPSLRI SSKAGFESTN SLNSVDNSFS STSRKHAPED TREFVGQLNI KVVKGSGLAV
301: RDMLTSDPYV VLSLGEQKAQ TTVKASDLNP VWNEVLTLSV PRNYGPLKLE VYDHDTFSAD DIMGEAEIDL KPMITAAMAF GDPSRHADMQ IGRWFMTRDN
401: CLLSDSIVNI SSGKVKQEVN LKLQNVESGE MELELEWSRL D

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.