Factsheet for Solyc02g024020.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
nucleus 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029572.1-P	Field mustard	cytosol	66.16	79.35
KRH11784	Soybean	cytosol	76.44	78.09
VIT_10s0003g04900.t01	Wine grape	cytosol	77.04	77.27
KRH36796	Soybean	cytosol	75.53	77.16
KRH59111	Soybean	cytosol	74.02	74.7
CDY62002	Canola	mitochondrion	75.83	74.48
CDY21329	Canola	mitochondrion	75.83	74.48
CDX76421	Canola	cytosol	73.72	74.16
KRH42994	Soybean	cytosol	73.41	74.09
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	75.23	73.89
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	74.32	73.21
CDX82807	Canola	cytosol	69.79	73.1
CDY46364	Canola	cytosol, mitochondrion, nucleus	75.83	72.75
CDY39164	Canola	cytosol, mitochondrion, nucleus	74.32	72.35
CDY58481	Canola	cytosol, mitochondrion, nucleus	71.9	70.41
Bra038783.1-P	Field mustard	cytosol	71.9	70.41
CDX94026	Canola	cytosol, mitochondrion, nucleus	71.0	69.53
Os06t0609450-01	Rice	cytosol	28.7	68.84
KRH71995	Soybean	cytosol	22.66	68.81
CDY65341	Canola	plastid	74.32	66.31
EER88634	Sorghum	cytosol	65.26	65.26
Os02t0198300-02	Rice	plasma membrane	62.24	64.38
TraesCS6A01G160700.1	Wheat	cytosol	62.54	64.09
HORVU6Hr1G032940.1	Barley	cytosol	62.24	63.78
KXG29722	Sorghum	cytosol	60.12	63.58
TraesCS6B01G190600.1	Wheat	cytosol	61.33	62.85
TraesCS6A01G285400.2	Wheat	golgi	62.24	62.05
EES05611	Sorghum	cytosol	61.63	61.45
TraesCS6D01G152000.1	Wheat	cytosol	61.63	59.82
Os02t0722500-01	Rice	cytosol	59.82	59.64
GSMUA_Achr7P20210_001	Banana	cytosol	40.18	59.11
Zm00001d034981_P001	Maize	cytosol	33.53	58.12
Bra013508.1-P	Field mustard	cytosol	66.16	55.73
Bra024773.1-P	Field mustard	cytosol	45.62	52.07
HORVU6Hr1G071850.3	Barley	mitochondrion	63.14	47.39
TraesCS6D01G265900.2	Wheat	cytosol	62.24	47.03
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	22.36	44.85
TraesCS6B01G314300.1	Wheat	cytosol	59.82	44.3
Solyc08g043140.2.1	Tomato	cytosol	52.57	44.05
Solyc02g063360.2.1	Tomato	cytosol	22.05	43.98
Solyc12g040800.1.1	Tomato	cytosol	22.05	43.98
Solyc06g068940.2.1	Tomato	cytosol	21.75	43.64
Solyc03g118710.2.1	Tomato	cytosol	21.75	43.64
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	21.75	43.64
Solyc02g063370.2.1	Tomato	cytosol	21.45	42.77
CDY60369	Canola	cytosol	23.26	41.4
Solyc04g015070.2.1	Tomato	cytosol	20.24	39.65
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	19.94	39.52
Zm00001d005398_P001	Maize	cytosol	41.39	38.06
Solyc04g007800.2.1	Tomato	cytosol	19.03	37.72
Zm00001d007340_P001	Maize	cytosol	39.58	35.31
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	69.79	32.77

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892
InterPro:IPR038508	UniProt:K4B551	PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF57863	EnsemblPlantsGene:Solyc02g024020.2	EnsemblPlants:Solyc02g024020.2.1	UniParc:UPI0002768BC1	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:24791405..24802376

Molecular Weight (calculated)

36656.8 Da

IEP (calculated)

5.495

GRAVY (calculated)

-0.351

Length

331 amino acids

Sequence
(BLAST)

001: MSQRPSALTR PTSSKRRLKD LLLQKDNRVC ADCGSPDPKW ASTNIGVFIC LKCCGVHRSL GTHISKVLSV TLDEWSDDEI DAMVEVGGNA SANSIYEAYI
101: PEGISKPGAD ASHEQRSKFI RSKYERQEFL KPSLRILSNQ KKGSLKTSLS NKITDSFRSS SSTSQKSEGM VEFIGMLKVK VIKGTNLAIR DMLSSDPYVV
201: LNLGKQKVQT SVVKSNLNPI WNEEVMLSVP QDYGVVRLQV YDHDTFSADD IMGEAEIDIQ PMITSAMAFG DAGMFGNMQI GKWLKSNDNA LLDDSTVNIV
301: DGKVKQEVNL KLQNVESGDL ELELEWIPLD Q

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.