Factsheet for Solyc06g068940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074100	Potato	cytosol	95.15	95.15
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	81.21	81.21
Solyc12g040800.1.1	Tomato	cytosol	80.0	79.52
Solyc03g118710.2.1	Tomato	cytosol	78.18	78.18
KRH41845	Soybean	cytosol	70.91	70.91
AT3G17980.1	Thale cress	cytosol	74.55	69.49
CDY51927	Canola	cytosol	73.94	68.93
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	74.55	67.96
CDX75953	Canola	cytosol	72.73	67.8
KRH60540	Soybean	cytosol	70.3	67.05
KRH48640	Soybean	cytosol	71.52	67.05
CDX77307	Canola	mitochondrion	67.88	65.88
CDY16452	Canola	mitochondrion	67.88	65.88
Bra014145.1-P	Field mustard	mitochondrion	67.88	65.88
Bra001693.1-P	Field mustard	cytosol	70.3	65.54
Solyc02g063370.2.1	Tomato	cytosol	64.85	64.46
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	64.24	64.24
Solyc02g063360.2.1	Tomato	cytosol	64.24	63.86
CDX82060	Canola	mitochondrion	64.85	63.69
CDY47746	Canola	mitochondrion	64.24	63.1
GSMUA_Achr10P...	Banana	cytosol	61.82	62.96
GSMUA_Achr6P07630_001	Banana	cytosol	63.03	62.65
Bra008104.1-P	Field mustard	cytosol, mitochondrion	63.64	62.5
KRH39062	Soybean	cytosol	41.21	62.39
GSMUA_Achr2P15950_001	Banana	cytosol	64.85	61.85
AT1G73580.1	Thale cress	mitochondrion	62.42	61.31
AT1G48590.2	Thale cress	cytosol, plasma membrane	71.52	59.0
KRH39078	Soybean	endoplasmic reticulum, extracellular	72.73	58.82
TraesCS2A01G501300.1	Wheat	mitochondrion	58.79	57.06
HORVU0Hr1G039050.2	Barley	mitochondrion	58.18	56.8
Os02t0327000-01	Rice	cytosol	56.36	56.36
EES01097	Sorghum	cytosol	56.36	56.02
TraesCS2B01G529400.1	Wheat	mitochondrion	56.36	54.71
TraesCS2D01G501800.2	Wheat	mitochondrion	56.36	54.71
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	53.94	53.29
Zm00001d011396_P001	Maize	cytosol	54.55	51.14
Zm00001d044179_P001	Maize	cytosol	55.76	45.77
Solyc04g007800.2.1	Tomato	cytosol	44.85	44.31
Solyc04g015070.2.1	Tomato	cytosol	36.97	36.09
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	43.64	21.75
Solyc08g043140.2.1	Tomato	cytosol	40.0	16.71

Protein Annotations

EnsemblPlants:Solyc06g068940.2.1	EnsemblPlantsGene:Solyc06g068940.2	InterPro:C2_dom	InterPro:IPR000008	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310
PFAM:PF00168	PFscan:PS50004	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002766774	UniProt:K4C867
MapMan:11.1.2.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:42765166..42766676

Molecular Weight (calculated)

18972.0 Da

IEP (calculated)

7.091

GRAVY (calculated)

-0.368

Length

165 amino acids

Sequence
(BLAST)

001: MDNLFGLLRI KIKRGINLAV RDVRSSDPYV VVKMGNQKLK TRVIKKDVNP EWNEYLTLSV SDANLPVKLT VYDHDRFSMD DKMGDAEFDI KPFLDALKMN
101: LDSLPCGTVI TRETPCRTNC LSEESKVTWQ DNQVVQDLCL RLRNVECGEV ELQLQWINIP GSKRL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.