Factsheet for Os02t0327000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0124300-01
Os12t0122000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01540.1	Os11t0124300-01	AT3G54220.1	19228333
AT2G01540.1	Os12t0122000-01	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01097	Sorghum	cytosol	85.45	84.94
TraesCS2B01G529400.1	Wheat	mitochondrion	82.42	80.0
TraesCS2D01G501800.2	Wheat	mitochondrion	82.42	80.0
TraesCS2A01G501300.1	Wheat	mitochondrion	80.61	78.24
HORVU0Hr1G039050.2	Barley	mitochondrion	79.39	77.51
Zm00001d011396_P001	Maize	cytosol	81.82	76.7
GSMUA_Achr10P...	Banana	cytosol	72.12	73.46
Zm00001d044179_P001	Maize	cytosol	83.64	68.66
GSMUA_Achr6P07630_001	Banana	cytosol	67.88	67.47
GSMUA_Achr2P15950_001	Banana	cytosol	69.7	66.47
KRG97928	Soybean	cytosol	61.82	61.82
VIT_14s0006g01250.t01	Wine grape	cytosol	61.82	61.82
KRH30951	Soybean	cytosol	60.61	60.61
Solyc12g040800.1.1	Tomato	cytosol	60.61	60.24
Solyc03g118720.2.1	Tomato	cytosol, mitochondrion	60.0	60.0
KRH41845	Soybean	cytosol	59.39	59.39
PGSC0003DMT400078786	Potato	cytosol	59.39	59.39
Solyc03g118710.2.1	Tomato	cytosol	58.79	58.79
VIT_01s0011g05230.t01	Wine grape	cytosol	58.79	58.43
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	58.18	58.18
Bra014145.1-P	Field mustard	mitochondrion	59.39	57.65
CDX77307	Canola	mitochondrion	59.39	57.65
CDY16452	Canola	mitochondrion	59.39	57.65
PGSC0003DMT400074100	Potato	cytosol	57.58	57.58
Solyc02g063360.2.1	Tomato	cytosol	57.58	57.23
AT1G70810.1	Thale cress	cytosol	56.97	56.97
KRH48640	Soybean	cytosol	60.61	56.82
KRH60540	Soybean	cytosol	59.39	56.65
Solyc02g063370.2.1	Tomato	cytosol	56.97	56.63
Solyc06g068940.2.1	Tomato	cytosol	56.36	56.36
VIT_17s0000g02290.t01	Wine grape	cytosol, plastid	61.82	56.35
PGSC0003DMT400037472	Potato	cytosol	61.21	55.8
Bra018410.1-P	Field mustard	mitochondrion	56.36	55.36
CDY27005	Canola	cytosol	56.36	55.36
CDY38572	Canola	mitochondrion	56.36	55.36
AT3G17980.1	Thale cress	cytosol	58.79	54.8
CDX75953	Canola	cytosol	58.79	54.8
CDY51927	Canola	cytosol	58.79	54.8
Bra025441.1-P	Field mustard	cytosol	55.76	54.76
CDX99693	Canola	cytosol	55.76	54.76
CDY01709	Canola	mitochondrion	55.76	54.76
CDY71117	Canola	cytosol	52.73	54.38
Bra024565.1-P	Field mustard	cytosol	52.12	53.75
CDY04742	Canola	cytosol	52.12	53.75
CDY71433	Canola	cytosol	52.12	53.75
Bra028147.1-P	Field mustard	cytosol	54.55	53.57
Bra001693.1-P	Field mustard	cytosol	56.97	53.11
CDX82060	Canola	mitochondrion	53.33	52.38
CDY47746	Canola	mitochondrion	53.33	52.38
KRG89347	Soybean	cytosol	21.21	52.24
AT1G23140.1	Thale cress	cytosol, mitochondrion	52.12	52.12
Bra016185.1-P	Field mustard	cytosol	52.12	52.12
CDX96279	Canola	cytosol	52.12	52.12
CDY11543	Canola	cytosol	52.12	52.12
CDX74562	Canola	cytosol	52.73	52.1
Bra008104.1-P	Field mustard	cytosol, mitochondrion	52.73	51.79
Bra028148.1-P	Field mustard	mitochondrion	52.73	51.79
CDX74561	Canola	mitochondrion	52.73	51.79
Os07t0108400-01	Rice	cytosol	54.55	51.72
CDY27654	Canola	cytosol	55.76	51.4
KRH39062	Soybean	cytosol	33.94	51.38
Os07t0501700-01	Rice	cytosol, mitochondrion	50.91	50.6
AT5G37740.2	Thale cress	cytosol	54.55	50.56
KRH50393	Soybean	cytosol	51.52	50.0
PGSC0003DMT400042134	Potato	cytosol	40.61	49.63
AT1G48590.2	Thale cress	cytosol, plasma membrane	60.0	49.5
AT1G66360.1	Thale cress	cytosol	52.12	49.43
AT1G73580.1	Thale cress	mitochondrion	50.3	49.4
Bra004161.1-P	Field mustard	cytosol	52.12	49.14
CDX96152	Canola	cytosol	52.12	49.14
Solyc06g053390.2.1	Tomato	cytosol, mitochondrion	49.7	49.1
CDY11544	Canola	cytosol	54.55	48.65
CDY07499	Canola	cytosol	51.52	48.57
KRH39078	Soybean	endoplasmic reticulum, extracellular	60.0	48.53
Bra016186.1-P	Field mustard	cytosol	53.94	48.11
CDX96278	Canola	cytosol	53.94	48.11
AT1G70800.1	Thale cress	cytosol	50.3	47.7
KRG94240	Soybean	cytosol	48.48	47.34
KRH38191	Soybean	cytosol	51.52	47.22
KRG94243	Soybean	cytosol, mitochondrion	49.09	46.55
Bra017445.1-P	Field mustard	cytosol	50.3	46.11
Bra024877.1-P	Field mustard	cytosol	50.3	46.11
CDY04090	Canola	cytosol	50.3	46.11
CDY17665	Canola	cytosol	50.3	46.11
CDY58016	Canola	cytosol	50.3	46.11
CDY70365	Canola	cytosol	50.3	46.11
PGSC0003DMT400020051	Potato	cytosol	45.45	45.73
AT1G70790.1	Thale cress	cytosol	50.91	45.41
AT2G01540.1	Thale cress	cytosol	49.09	45.0
PGSC0003DMT400059720	Potato	cytosol	45.45	44.91
Bra026650.1-P	Field mustard	cytosol	48.48	44.44
CDY09436	Canola	cytosol	48.48	44.44
CDY48816	Canola	cytosol	48.48	44.44
Solyc04g007800.2.1	Tomato	cytosol	44.85	44.31
CDY23479	Canola	cytosol	49.09	43.78
Os06t0609450-01	Rice	cytosol	35.76	42.75
Os07t0500300-01	Rice	extracellular	42.42	40.46
Os07t0462500-00	Rice	cytosol	44.85	40.0
Os09t0251800-01	Rice	cytosol, plasma membrane	40.61	39.18
CDY23477	Canola	cytosol	29.09	38.4
CDY49631	Canola	extracellular	24.24	33.33
Bra003941.1-P	Field mustard	cytosol	49.7	32.41
CDY70119	Canola	cytosol	49.7	32.41
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	45.45	31.78
Bra003940.1-P	Field mustard	cytosol	24.85	29.29
CDX68329	Canola	cytosol	24.24	28.99
Os02t0722500-01	Rice	cytosol	41.21	20.48
Os01t0951100-01	Rice	cytosol	45.45	19.68
Os05t0382000-01	Rice	cytosol	46.06	19.24
Os02t0198300-02	Rice	plasma membrane	36.97	19.06
Os07t0108500-01	Rice	mitochondrion	13.33	12.02
CDY23476	Canola	cytosol	0.61	0.85

Protein Annotations

MapMan:11.1.2.1.2	EntrezGene:4329192	PDB:4RJ9	EMBL:AK073631	EMBL:AK104165	ProteinID:BAD15699.1
ProteinID:BAD16390.1	ProteinID:BAF08623.1	ProteinID:BAS78417.1	InterPro:C2_dom	ProteinID:EAZ22831.1	EMBL:EF584506
GO:GO:0003674	GO:GO:0003824	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0008289	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009738	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	GO:GO:1901002	GO:GO:1902479
InterPro:IPR000008	EnsemblPlantsGene:Os02g0327000	EnsemblPlants:Os02t0327000-01	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR23180
PANTHER:PTHR23180:SF310	UniProt:Q6YWF1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0000358B34	RefSeq:XP_015627601.1
SEG:seg	:	:	:	:	:

Description

GTPase-activating protein 1C2 domain containing protein. (Os02t0327000-01);C2 domain containing protein. (Os02t0327000-02)

Coordinates

chr2:+:13173784..13176182

Molecular Weight (calculated)

18548.7 Da

IEP (calculated)

6.018

GRAVY (calculated)

-0.155

Length

165 amino acids

Sequence
(BLAST)

001: MLGHLVGLVK VRVVRGVNLA VRDLRSSDPY VIVRMGKQKL KTRVIKKTTN PEWNDELTLS IEDPAVPVRL EVYDKDTFID DAMGNAELDI RPLVEVVKMK
101: IEGVADNTVV KKVVPNRQNC LAEESTIYIS EGKVKQDVVL RLRDVECGEI ELQLQWVDIP GSKGV

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.