Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01709 | Canola | mitochondrion | 79.78 | 84.52 |
| Bra028147.1-P | Field mustard | cytosol | 79.21 | 83.93 |
| CDY38572 | Canola | mitochondrion | 78.09 | 82.74 |
| Bra018410.1-P | Field mustard | mitochondrion | 78.09 | 82.74 |
| CDX74562 | Canola | cytosol | 77.53 | 82.63 |
| CDX74561 | Canola | mitochondrion | 77.53 | 82.14 |
| Bra028148.1-P | Field mustard | mitochondrion | 77.53 | 82.14 |
| CDY27005 | Canola | cytosol | 76.97 | 81.55 |
| Bra025441.1-P | Field mustard | cytosol | 75.28 | 79.76 |
| CDX99693 | Canola | cytosol | 74.16 | 78.57 |
| CDY27654 | Canola | cytosol | 76.4 | 75.98 |
| KRG97928 | Soybean | cytosol | 64.61 | 69.7 |
| KRH30951 | Soybean | cytosol | 63.48 | 68.48 |
| VIT_14s0006g01250.t01 | Wine grape | cytosol | 61.8 | 66.67 |
| AT1G66360.1 | Thale cress | cytosol | 64.04 | 65.52 |
| Solyc02g063360.2.1 | Tomato | cytosol | 60.11 | 64.46 |
| Solyc02g063370.2.1 | Tomato | cytosol | 58.43 | 62.65 |
| PGSC0003DMT400078786 | Potato | cytosol | 57.87 | 62.42 |
| Solyc02g091520.2.1 | Tomato | cytosol, mitochondrion | 57.87 | 62.42 |
| AT1G70810.1 | Thale cress | cytosol | 56.74 | 61.21 |
| AT3G17980.1 | Thale cress | cytosol | 60.67 | 61.02 |
| AT1G73580.1 | Thale cress | mitochondrion | 55.06 | 58.33 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 55.06 | 57.65 |
| TraesCS2B01G529400.1 | Wheat | mitochondrion | 55.06 | 57.65 |
| TraesCS2D01G501800.2 | Wheat | mitochondrion | 54.49 | 57.06 |
| HORVU0Hr1G039050.2 | Barley | mitochondrion | 53.93 | 56.8 |
| GSMUA_Achr10P... | Banana | cytosol | 51.69 | 56.79 |
| GSMUA_Achr2P15950_001 | Banana | cytosol | 55.06 | 56.65 |
| GSMUA_Achr6P07630_001 | Banana | cytosol | 51.69 | 55.42 |
| AT1G23140.1 | Thale cress | cytosol, mitochondrion | 51.12 | 55.15 |
| EES01097 | Sorghum | cytosol | 51.12 | 54.82 |
| Os02t0327000-01 | Rice | cytosol | 50.56 | 54.55 |
| AT2G01540.1 | Thale cress | cytosol | 53.37 | 52.78 |
| AT1G70800.1 | Thale cress | cytosol | 51.12 | 52.3 |
| AT1G48590.2 | Thale cress | cytosol, plasma membrane | 57.87 | 51.5 |
| AT1G70790.1 | Thale cress | cytosol | 53.37 | 51.35 |
| Zm00001d011396_P001 | Maize | cytosol | 50.0 | 50.57 |
| CDY01706 | Canola | golgi, mitochondrion, plasma membrane, plastid | 66.29 | 50.0 |
| Zm00001d044179_P001 | Maize | cytosol | 52.81 | 46.77 |
| AT5G47710.1 | Thale cress | cytosol | 35.39 | 37.95 |
| AT4G05330.1 | Thale cress | cytosol, mitochondrion, nucleus | 41.57 | 22.02 |
| AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 40.45 | 21.36 |
| AT3G07940.1 | Thale cress | cytosol | 37.64 | 17.4 |
Protein Annotations
| MapMan:11.1.2.1.2 | Gene3D:2.60.40.150 | EntrezGene:833752 | ProteinID:AED94226.1 | ArrayExpress:AT5G37740 | EnsemblPlantsGene:AT5G37740 |
| RefSeq:AT5G37740 | TAIR:AT5G37740 | RefSeq:AT5G37740-TAIR-G | EnsemblPlants:AT5G37740.2 | TAIR:AT5G37740.2 | InterPro:C2_dom |
| InterPro:C2_domain_sf | UniProt:F4K8L6 | InterPro:IPR000008 | InterPro:IPR035892 | RefSeq:NP_001190431.1 | PFAM:PF00168 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50004 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF375 | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0001E9310A |
Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
Coordinates
chr5:+:14992049..14993562
Molecular Weight (calculated)
20074.5 Da
IEP (calculated)
7.179
GRAVY (calculated)
-0.142
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQNLM RLLNCWSKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI
101: GPFIEAIKFA HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI
101: GPFIEAIKFA HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.