CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74562	Canola	cytosol	94.05	94.61
CDY38572	Canola	mitochondrion	88.1	88.1
CDY27005	Canola	cytosol	86.9	86.9
CDX74561	Canola	mitochondrion	84.52	84.52
CDX99693	Canola	cytosol	82.14	82.14
AT5G37740.2	Thale cress	cytosol	84.52	79.78
CDY27654	Canola	cytosol	83.33	78.21
KRH30951	Soybean	cytosol	67.26	68.48
KRG97928	Soybean	cytosol	67.26	68.48
VIT_14s0006g01250.t01	Wine grape	cytosol	65.48	66.67
CDX96152	Canola	cytosol	69.05	66.29
CDY07499	Canola	cytosol	69.05	66.29
PGSC0003DMT400078786	Potato	cytosol	63.1	64.24
Solyc02g091520.2.1	Tomato	cytosol, mitochondrion	63.1	64.24
CDX77307	Canola	mitochondrion	64.29	63.53
CDY16452	Canola	mitochondrion	64.29	63.53
Solyc02g063360.2.1	Tomato	cytosol	61.31	62.05
CDY51927	Canola	cytosol	64.88	61.58
Solyc02g063370.2.1	Tomato	cytosol	60.71	61.45
CDX75953	Canola	cytosol	63.69	60.45
CDY47746	Canola	mitochondrion	59.52	59.52
CDX82060	Canola	mitochondrion	59.52	59.52
TraesCS2A01G501300.1	Wheat	mitochondrion	58.93	58.24
CDY11543	Canola	cytosol	57.14	58.18
CDX96279	Canola	cytosol	57.14	58.18
GSMUA_Achr10P...	Banana	cytosol	55.95	58.02
HORVU0Hr1G039050.2	Barley	mitochondrion	57.74	57.4
GSMUA_Achr6P07630_001	Banana	cytosol	56.55	57.23
TraesCS2B01G529400.1	Wheat	mitochondrion	57.74	57.06
TraesCS2D01G501800.2	Wheat	mitochondrion	57.74	57.06
GSMUA_Achr2P15950_001	Banana	cytosol	58.33	56.65
Os02t0327000-01	Rice	cytosol	54.76	55.76
CDY71117	Canola	cytosol	52.38	55.0
EES01097	Sorghum	cytosol	54.17	54.82
CDY71433	Canola	cytosol	51.19	53.75
CDY04742	Canola	cytosol	51.19	53.75
CDY09436	Canola	cytosol	56.55	52.78
CDY58016	Canola	cytosol	56.55	52.78
CDY48816	Canola	cytosol	56.55	52.78
CDY17665	Canola	cytosol	56.55	52.78
CDY04090	Canola	cytosol	55.95	52.22
CDY11544	Canola	cytosol	57.14	51.89
CDY70365	Canola	cytosol	55.36	51.67
CDX96278	Canola	cytosol	56.55	51.35
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	71.43	50.85
Zm00001d011396_P001	Maize	cytosol	52.38	50.0
CDY49631	Canola	extracellular	33.93	47.5
CDY23479	Canola	cytosol	51.19	46.49
Zm00001d044179_P001	Maize	cytosol	54.17	45.27
CDY23477	Canola	cytosol	28.57	38.4
CDY69110	Canola	cytosol	20.83	37.23
CDY40545	Canola	endoplasmic reticulum, extracellular	39.88	33.84
CDY70119	Canola	cytosol	50.6	33.6
CDX68329	Canola	cytosol	22.62	27.54
CDY62002	Canola	mitochondrion	46.43	23.15
CDY21329	Canola	mitochondrion	46.43	23.15
CDY39164	Canola	cytosol, mitochondrion, nucleus	45.83	22.65
CDY46364	Canola	cytosol, mitochondrion, nucleus	45.83	22.32
CDX82807	Canola	cytosol	41.07	21.84
CDX76421	Canola	cytosol	42.26	21.58
CDX94026	Canola	cytosol, mitochondrion, nucleus	39.88	19.82
CDY58481	Canola	cytosol, mitochondrion, nucleus	39.29	19.53
CDY65341	Canola	plastid	42.86	19.41
CDY22145	Canola	cytosol	40.48	17.75
CDY28007	Canola	cytosol	40.48	16.75
CDY35974	Canola	cytosol	39.88	16.5
CDX74022	Canola	cytosol	35.71	15.62
CDY60369	Canola	cytosol	13.69	12.37
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	41.67	9.93
CDY23476	Canola	cytosol	0.6	0.85

Protein Annotations

EnsemblPlants:CDY01709	EnsemblPlantsGene:GSBRNA2T00112802001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF375	PFAM:PF00168	PFscan:PS50004	ProteinID:CDY01709
ProteinID:CDY01709.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EF377F	MapMan:11.1.2.1.2	:

Description

BnaC04g30430D

Coordinates

chrLK031928:-:714871..716131

Molecular Weight (calculated)

19125.2 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.240

Length

168 amino acids

Sequence
(BLAST)

001: MENLLGLLRI HVKRGVNLAI RDISSSDPYV VVHSGKQKLK TRVVKHSLNP EWNDHLTLSV TDPNLPVKLM VYDYDVLSAD DKMGEAEFNI AQYLEAIKFR
101: HTLEGGLPDG TIIMKIQPSR QNCLSEESHI VWNQGKLVQN MFLRLQHVEC GEVEIQLEWI DIPGSRGI

Best Arabidopsis Sequence Match ( AT5G37740.1 )
(BLAST)

001: MENLVGLLRI HVKRGVNLAI RDISSSDPYI VVHCGKQKLK TRVVKHSVNP EWNDDLTLSV TDPNLPIKLT VYDYDLLSAD DKMGEAEFHI GPFIEAIKFA
101: HQLGPGLPNG TIIKKIEPSR KNCLSESSHI VLNQGKIVQN MFLRLQHVEC GEVELQLEWI DVPGSRGI

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4K8L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.