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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75953 Canola cytosol 98.31 98.31
Bra001693.1-P Field mustard cytosol 95.48 95.48
AT3G17980.1 Thale cress cytosol 94.92 94.92
CDY16452 Canola mitochondrion 79.1 82.35
CDX77307 Canola mitochondrion 77.97 81.18
KRH41845 Soybean cytosol 72.88 78.18
KRH60540 Soybean cytosol 75.71 77.46
PGSC0003DMT400074100 Potato cytosol 71.19 76.36
Solyc12g040800.1.1 Tomato cytosol 71.19 75.9
Solyc03g118720.2.1 Tomato cytosol, mitochondrion 69.49 74.55
Solyc03g118710.2.1 Tomato cytosol 69.49 74.55
Solyc06g068940.2.1 Tomato cytosol 68.93 73.94
PGSC0003DMT400037472 Potato cytosol 74.58 72.93
KRH48640 Soybean cytosol 69.49 69.89
CDX82060 Canola mitochondrion 65.54 69.05
CDY47746 Canola mitochondrion 64.97 68.45
KRH39062 Soybean cytosol 41.24 66.97
CDY38572 Canola mitochondrion 63.28 66.67
CDY27005 Canola cytosol 62.71 66.07
CDX99693 Canola cytosol 62.15 65.48
CDY01709 Canola mitochondrion 61.58 64.88
GSMUA_Achr10P... Banana cytosol 59.32 64.81
CDX74561 Canola mitochondrion 59.89 63.1
CDX74562 Canola cytosol 59.32 62.87
GSMUA_Achr6P07630_001 Banana cytosol 58.76 62.65
GSMUA_Achr2P15950_001 Banana cytosol 61.02 62.43
KRH39078 Soybean endoplasmic reticulum, extracellular 70.62 61.27
CDY27654 Canola cytosol 61.58 60.89
Os02t0327000-01 Rice cytosol 54.8 58.79
TraesCS2A01G501300.1 Wheat mitochondrion 55.93 58.24
HORVU0Hr1G039050.2 Barley mitochondrion 55.37 57.99
EES01097 Sorghum cytosol 53.67 57.23
CDX96152 Canola cytosol 55.93 56.57
TraesCS2B01G529400.1 Wheat mitochondrion 54.24 56.47
TraesCS2D01G501800.2 Wheat mitochondrion 53.67 55.88
CDY04742 Canola cytosol 50.28 55.62
CDY71433 Canola cytosol 50.28 55.62
CDY71117 Canola cytosol 50.28 55.62
CDY07499 Canola cytosol 54.8 55.43
CDX96279 Canola cytosol 50.85 54.55
CDY11543 Canola cytosol 50.85 54.55
CDY11544 Canola cytosol 55.93 53.51
Zm00001d011396_P001 Maize cytosol 53.11 53.41
CDX96278 Canola cytosol 55.37 52.97
CDY23479 Canola cytosol 50.85 48.65
CDY70365 Canola cytosol 49.15 48.33
CDY48816 Canola cytosol 49.15 48.33
CDY04090 Canola cytosol 49.15 48.33
CDY09436 Canola cytosol 49.15 48.33
Zm00001d044179_P001 Maize cytosol 54.8 48.26
CDY17665 Canola cytosol 48.59 47.78
CDY58016 Canola cytosol 48.59 47.78
CDY23477 Canola cytosol 29.38 41.6
CDY01706 Canola golgi, mitochondrion, plasma membrane, plastid 48.59 36.44
CDY49631 Canola extracellular 24.29 35.83
CDY40545 Canola endoplasmic reticulum, extracellular 39.55 35.35
CDY70119 Canola cytosol 50.28 35.18
CDY69110 Canola cytosol 18.08 34.04
CDX68329 Canola cytosol 22.6 28.99
CDX82807 Canola cytosol 38.42 21.52
CDY21329 Canola mitochondrion 40.68 21.36
CDY62002 Canola mitochondrion 40.68 21.36
CDY39164 Canola cytosol, mitochondrion, nucleus 40.11 20.88
CDY46364 Canola cytosol, mitochondrion, nucleus 40.11 20.58
CDX76421 Canola cytosol 37.85 20.36
CDX94026 Canola cytosol, mitochondrion, nucleus 36.72 19.23
CDY58481 Canola cytosol, mitochondrion, nucleus 36.16 18.93
CDY65341 Canola plastid 38.42 18.33
CDY22145 Canola cytosol 36.16 16.71
CDY35974 Canola cytosol 36.72 16.01
CDY28007 Canola cytosol 36.72 16.01
CDX74022 Canola cytosol 33.9 15.62
CDY60369 Canola cytosol 11.3 10.75
CDX79040 Canola cytosol, mitochondrion, nucleus, plastid 38.98 9.79
CDY23476 Canola cytosol 1.13 1.69
Protein Annotations
EnsemblPlants:CDY51927EnsemblPlantsGene:GSBRNA2T00004513001Gene3D:2.60.40.150InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008
InterPro:IPR035892PANTHER:PTHR23180PANTHER:PTHR23180:SF310PFAM:PF00168PFscan:PS50004ProteinID:CDY51927
ProteinID:CDY51927.1SEG:segSMART:SM00239SUPFAM:SSF49562UniParc:UPI0004EF3163UniProt:A0A078IPT2
MapMan:11.1.2.1.2:::::
Description
BnaAnng11040DBnaAnng11040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPT2]
Coordinates
chrLK033040:+:24372..25200
Molecular Weight (calculated)
19895.1 Da
IEP (calculated)
5.337
GRAVY (calculated)
-0.254
Length
177 amino acids
Sequence
(BLAST)
001: MTTTGPARTS SLMDDLLGLL RIRIKRGVNL AVRDINSSDP YIVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDPSLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVQPSRR NCLAEESKVT WIDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)
001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL
Arabidopsis Description
CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.