CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024773.1-P	Field mustard	cytosol	85.48	54.83
CDY46364	Canola	cytosol, mitochondrion, nucleus	53.76	28.99
CDY62002	Canola	mitochondrion	52.15	28.78
CDY21329	Canola	mitochondrion	52.15	28.78
CDY69110	Canola	cytosol	13.98	27.66
CDY39164	Canola	cytosol, mitochondrion, nucleus	50.54	27.65
GSMUA_Achr7P20210_001	Banana	cytosol	31.18	25.78
CDX76421	Canola	cytosol	45.16	25.53
CDY58481	Canola	cytosol, mitochondrion, nucleus	45.16	24.85
CDX94026	Canola	cytosol, mitochondrion, nucleus	44.62	24.56
CDX82807	Canola	cytosol	39.78	23.42
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	41.4	23.26
CDY65341	Canola	plastid	46.24	23.18
VIT_10s0003g04900.t01	Wine grape	cytosol	39.25	22.12
Zm00001d034981_P001	Maize	cytosol	22.58	21.99
KXG29722	Sorghum	cytosol	35.48	21.09
Os02t0198300-02	Rice	plasma membrane	35.48	20.62
TraesCS6A01G160700.1	Wheat	cytosol	34.95	20.12
TraesCS6B01G190600.1	Wheat	cytosol	34.41	19.81
HORVU6Hr1G032940.1	Barley	cytosol	34.41	19.81
EER88634	Sorghum	cytosol	34.95	19.64
TraesCS6D01G152000.1	Wheat	cytosol	34.95	19.06
EES05611	Sorghum	cytosol	33.87	18.98
TraesCS6A01G285400.2	Wheat	golgi	33.33	18.67
Os02t0722500-01	Rice	cytosol	31.18	17.47
Zm00001d005398_P001	Maize	cytosol	32.26	16.67
KRH71995	Soybean	cytosol	9.68	16.51
CDY47746	Canola	mitochondrion	13.98	15.48
CDX82060	Canola	mitochondrion	13.98	15.48
Zm00001d007340_P001	Maize	cytosol	29.57	14.82
TraesCS6D01G265900.2	Wheat	cytosol	33.33	14.16
TraesCS6B01G314300.1	Wheat	cytosol	33.87	14.09
HORVU6Hr1G071850.3	Barley	mitochondrion	32.8	13.83
CDX74561	Canola	mitochondrion	12.37	13.69
CDY01709	Canola	mitochondrion	12.37	13.69
CDY11544	Canola	cytosol	13.44	13.51
CDX96278	Canola	cytosol	13.44	13.51
CDY22145	Canola	cytosol	27.42	13.32
CDX74562	Canola	cytosol	11.83	13.17
CDY27005	Canola	cytosol	11.83	13.1
CDY38572	Canola	mitochondrion	11.83	13.1
Os06t0609450-01	Rice	cytosol	9.68	13.04
CDY16452	Canola	mitochondrion	11.83	12.94
CDX77307	Canola	mitochondrion	11.83	12.94
CDX96279	Canola	cytosol	11.29	12.73
CDY11543	Canola	cytosol	11.29	12.73
CDX99693	Canola	cytosol	11.29	12.5
CDX74022	Canola	cytosol	25.81	12.5
CDY23479	Canola	cytosol	12.37	12.43
CDY40545	Canola	endoplasmic reticulum, extracellular	12.9	12.12
CDY28007	Canola	cytosol	26.34	12.07
CDY35974	Canola	cytosol	26.34	12.07
CDY04742	Canola	cytosol	10.22	11.88
CDY71433	Canola	cytosol	10.22	11.88
CDY27654	Canola	cytosol	11.29	11.73
CDY70365	Canola	cytosol	11.29	11.67
CDY04090	Canola	cytosol	11.29	11.67
CDY17665	Canola	cytosol	11.29	11.67
CDY58016	Canola	cytosol	11.29	11.67
CDY70119	Canola	cytosol	15.59	11.46
CDY51927	Canola	cytosol	10.75	11.3
CDY71117	Canola	cytosol	9.68	11.25
CDY48816	Canola	cytosol	10.75	11.11
CDY09436	Canola	cytosol	10.75	11.11
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	40.86	10.78
CDX75953	Canola	cytosol	10.22	10.73
CDX96152	Canola	cytosol	9.14	9.71
CDY07499	Canola	cytosol	9.14	9.71
CDY49631	Canola	extracellular	5.38	8.33
CDY01706	Canola	golgi, mitochondrion, plasma membrane, plastid	5.91	4.66
CDY23477	Canola	cytosol	2.15	3.2
CDX68329	Canola	cytosol	1.61	2.17
CDY23476	Canola	cytosol	0.54	0.85

Protein Annotations

EnsemblPlants:CDY60369	EnsemblPlantsGene:GSBRNA2T00028533001	Gene3D:3.30.40.160	InterPro:ArfGAP_dom_sf	InterPro:IPR038508	PANTHER:PTHR23180
PANTHER:PTHR23180:SF245	ProteinID:CDY60369	ProteinID:CDY60369.1	UniParc:UPI0004EDF120	UniProt:A0A078J907	MapMan:35.1

Description

BnaA09g54460DBnaA09g54460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J907]

Coordinates

chrLK033873:+:33260..34075

Molecular Weight (calculated)

21213.4 Da

IEP (calculated)

10.406

GRAVY (calculated)

-0.505

Length

186 amino acids

Sequence
(BLAST)

001: MIEYASASSI YEAFVPEGSY KPGPDVSHDQ RMRFIRSKYE HQEFLRPSLR ITSGKACSTK KPSFLNSSIS TKFMDSFRAH SSSKKIVTVK KGTNLAIRDM
101: MSSDPYVVLN LGRDANDTTT CGGSWRGQPS SSAYCFSRIL TFLSTNKTRY VRHRFVRTKL CIRFDSQSNT KKIHSDECFI VVYKKL

Best Arabidopsis Sequence Match ( AT4G05330.2 )
(BLAST)

001: MGLVFRSANI GVFICLKCCG VHRSLGTHIS KVLSVTLDEW SDEEVDSMIE IGGNASANSI YEAFLPDTCS KPGPDVNHDQ RMRFIRAKYE LQEFLKPSLR
101: ITSGKGSTKS SAFLTSSLSR KIMDSFRTNS SSQTMFQEGM VEFIGLLKVT IKKGTNLAIR DMMSSDPYVV LNLGKQKLQT TVMNSNLNPV WNQELMLSVP
201: ESYGPVKLQV YDYDTFSADD IMGEADIDIQ PLITSAMAFG DPEMFGDMQI GKWLKSHDNP LIDDSIINIV DGKVKQEVQI KLQNVESGEL ELEMEWLPLD
301: Q

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.