Factsheet for TraesCS6A01G160700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G032940.1	Barley	cytosol	95.36	95.36
TraesCS6B01G190600.1	Wheat	cytosol	95.05	95.05
TraesCS6D01G152000.1	Wheat	cytosol	97.52	92.38
Zm00001d015804_P005	Maize	cytosol, mitochondrion	82.66	82.92
KXG29722	Sorghum	cytosol	78.33	80.83
Os02t0198300-02	Rice	plasma membrane	78.95	79.69
GSMUA_Achr9P22350_001	Banana	cytosol	69.04	66.97
GSMUA_Achr4P03900_001	Banana	cytosol	68.11	66.47
Bra029572.1-P	Field mustard	cytosol	55.73	65.22
VIT_10s0003g04900.t01	Wine grape	cytosol	65.94	64.55
KRH36796	Soybean	cytosol	63.16	62.96
KRH11784	Soybean	cytosol	63.16	62.96
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	64.09	62.54
CDX82807	Canola	cytosol	60.68	62.03
KRH42994	Soybean	cytosol	60.99	60.06
CDY62002	Canola	mitochondrion	62.54	59.94
CDY21329	Canola	mitochondrion	62.54	59.94
CDX76421	Canola	cytosol	60.99	59.88
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	62.23	59.64
KRH59111	Soybean	cytosol	60.37	59.45
KRH71995	Soybean	cytosol	19.81	58.72
CDX94026	Canola	cytosol, mitochondrion, nucleus	61.3	58.58
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	60.68	58.33
CDY46364	Canola	cytosol, mitochondrion, nucleus	62.23	58.26
Bra038783.1-P	Field mustard	cytosol	60.68	57.99
CDY58481	Canola	cytosol, mitochondrion, nucleus	60.68	57.99
CDY39164	Canola	cytosol, mitochondrion, nucleus	60.37	57.35
TraesCS6A01G285400.2	Wheat	golgi	57.89	56.33
CDY65341	Canola	plastid	61.3	53.37
Bra013508.1-P	Field mustard	cytosol	55.11	45.29
Bra024773.1-P	Field mustard	cytosol	37.46	41.72
TraesCS2A01G261500.1	Wheat	cytosol	20.12	40.37
TraesCS1A01G239200.1	Wheat	cytosol	44.89	38.67
TraesCS6A01G394700.1	Wheat	cytosol, endoplasmic reticulum	19.81	38.32
TraesCS5A01G169300.1	Wheat	cytosol	20.12	38.01
TraesCS2A01G501300.1	Wheat	mitochondrion	19.81	37.65
TraesCS2A01G229100.1	Wheat	cytosol	18.89	36.31
TraesCS5A01G546300.1	Wheat	cytosol	18.89	36.31
CDY60369	Canola	cytosol	20.12	34.95
TraesCS2A01G229200.1	Wheat	endoplasmic reticulum, extracellular	17.65	34.34
TraesCS2A01G261400.1	Wheat	cytosol	17.34	32.94
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	60.68	27.8

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0008150	GO:GO:0030234
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	PFAM:PF00168	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	SMART:SM00105
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	EnsemblPlantsGene:TraesCS6A01G160700	EnsemblPlants:TraesCS6A01G160700.1	:

Description

No Description!

Coordinates

chr6A:+:155252458..155255735

Molecular Weight (calculated)

35099.9 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.289

Length

323 amino acids

Sequence
(BLAST)

001: MSGGHGDAGM ASGKMAKLKE LLQKSENRVC ADCSAPDPNW ASANIGVFIC VKCSGVHRSL GTHISKVMSV TLDKWSDDEI DSMVEVGGNL QANAIYEAFL
101: PEGYRKPHPD SAQEERQKFI KSKYELQEFL EPSLRIVSNH PSDAGKQASN SHSGSSKSEI GMVEFIGILN VKVIGGTKLA IRDMSSSDPY VVLTLGQQKV
201: QTSVIKGNLN PVWNEELKLS VPQKYGPLKL QVLDHDMVSK DDLMGEAEID LQPMINAAAS FGDPELLGDI QIGRWLKSND NALTADSAVM VTGGKVKQEV
301: SLNLQHTESG EVTVEMEWMA LNI

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.