Factsheet for Bra024773.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60369	Canola	cytosol	54.83	85.48
Bra029572.1-P	Field mustard	cytosol	49.66	52.17
Os06t0609450-01	Rice	cytosol	22.76	47.83
Bra038783.1-P	Field mustard	cytosol	55.52	47.63
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	52.07	45.62
VIT_10s0003g04900.t01	Wine grape	cytosol	49.31	43.33
Os02t0198300-02	Rice	plasma membrane	42.76	38.75
Bra013508.1-P	Field mustard	cytosol	51.72	38.17
HORVU6Hr1G032940.1	Barley	cytosol	42.07	37.77
TraesCS6A01G160700.1	Wheat	cytosol	41.72	37.46
TraesCS6B01G190600.1	Wheat	cytosol	41.38	37.15
KXG29722	Sorghum	cytosol	40.0	37.06
TraesCS6A01G285400.2	Wheat	golgi	42.41	37.05
EER88634	Sorghum	cytosol	41.72	36.56
EES05611	Sorghum	cytosol	41.38	36.14
Os02t0722500-01	Rice	cytosol	40.69	35.54
TraesCS6D01G152000.1	Wheat	cytosol	41.72	35.48
Bra028147.1-P	Field mustard	cytosol	19.66	33.93
GSMUA_Achr7P20210_001	Banana	cytosol	26.21	33.78
Bra008104.1-P	Field mustard	cytosol, mitochondrion	18.62	32.14
Bra018410.1-P	Field mustard	mitochondrion	17.93	30.95
Bra014145.1-P	Field mustard	mitochondrion	17.59	30.0
Bra028148.1-P	Field mustard	mitochondrion	17.24	29.76
Zm00001d034981_P001	Maize	cytosol	19.31	29.32
Bra016186.1-P	Field mustard	cytosol	18.62	29.19
Bra025441.1-P	Field mustard	cytosol	16.9	29.17
Bra016185.1-P	Field mustard	cytosol	16.55	29.09
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	33.45	28.96
TraesCS6D01G265900.2	Wheat	cytosol	42.41	28.08
TraesCS6B01G314300.1	Wheat	cytosol	42.76	27.74
Bra001693.1-P	Field mustard	cytosol	16.9	27.68
HORVU6Hr1G071850.3	Barley	mitochondrion	42.07	27.66
Bra024565.1-P	Field mustard	cytosol	14.83	26.88
Bra004161.1-P	Field mustard	cytosol	16.21	26.86
Bra024877.1-P	Field mustard	cytosol	16.55	26.67
KRH71995	Soybean	cytosol	10.0	26.61
Bra017445.1-P	Field mustard	cytosol	15.86	25.56
Bra026650.1-P	Field mustard	cytosol	15.52	25.0
Zm00001d005398_P001	Maize	cytosol	30.34	24.44
Bra029688.1-P	Field mustard	cytosol	32.41	23.15
Bra003941.1-P	Field mustard	cytosol	20.0	22.92
Bra001277.1-P	Field mustard	cytosol	30.34	22.92
Zm00001d007340_P001	Maize	cytosol	27.59	21.56
Bra003940.1-P	Field mustard	cytosol	4.83	10.0

Protein Annotations

EnsemblPlants:Bra024773.1	EnsemblPlants:Bra024773.1-P	EnsemblPlantsGene:Bra024773	Gene3D:2.60.40.150	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	InterPro:IPR038508
PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	PFAM:PF00168	PFscan:PS50004	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI00025426B6	UniProt:M4E7L7	MapMan:22.3.4.3	:

Description

AT4G05330 (E=7e-053) AGD13 | AGD13 (ARF-GAP domain 13); ARF GTPase activator/ zinc ion binding

Coordinates

chrA09:-:22838374..22840002

Molecular Weight (calculated)

32934.7 Da

IEP (calculated)

10.020

GRAVY (calculated)

-0.430

Length

290 amino acids

Sequence
(BLAST)

001: MGVLSVTQDE WSDEEVDSMI EYASASSIYE AFVPEGSSKP GPDVSHDQRM RFIRSKYEHQ EFLKPSLRIT SGKACSTKKP SFLNSSISTK FMDSFRANSS
101: SKKIVTVKKG TNLAIRDMMS SDPYVVLNLG KQKLQTTVVH SNLNPILLSV PESYGPMKLQ VYDYDTFSAD DIMGEAKLDV QPLITSAMAF EDAEMFGDMQ
201: IRKWLKSHDK PLIDDRLTAI IIGSRKIKSG RLVVRGRRGK LFNSLSKSTN KTRYVRHRFV RTKLCIRFDS ESNTKKIHSD ECFIVVYKKL

Best Arabidopsis Sequence Match ( AT4G05330.2 )
(BLAST)

001: MGLVFRSANI GVFICLKCCG VHRSLGTHIS KVLSVTLDEW SDEEVDSMIE IGGNASANSI YEAFLPDTCS KPGPDVNHDQ RMRFIRAKYE LQEFLKPSLR
101: ITSGKGSTKS SAFLTSSLSR KIMDSFRTNS SSQTMFQEGM VEFIGLLKVT IKKGTNLAIR DMMSSDPYVV LNLGKQKLQT TVMNSNLNPV WNQELMLSVP
201: ESYGPVKLQV YDYDTFSADD IMGEADIDIQ PLITSAMAFG DPEMFGDMQI GKWLKSHDNP LIDDSIINIV DGKVKQEVQI KLQNVESGEL ELEMEWLPLD
301: Q

Arabidopsis Description

AGD13AGD13 [Source:UniProtKB/TrEMBL;Acc:A0A178V602]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.