CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017881_P001	Maize	cytosol	96.69	96.69
Os02t0722500-01	Rice	cytosol	87.05	87.05
TraesCS6A01G285400.2	Wheat	golgi	82.83	82.83
Zm00001d051676_P007	Maize	endoplasmic reticulum, golgi	83.73	81.76
GSMUA_Achr9P12760_001	Banana	cytosol	66.87	67.48
GSMUA_Achr9P27900_001	Banana	cytosol	69.28	66.28
Bra029572.1-P	Field mustard	cytosol	53.61	64.49
VIT_10s0003g04900.t01	Wine grape	cytosol	62.95	63.33
TraesCS6D01G265900.2	Wheat	cytosol	82.83	62.79
HORVU6Hr1G071850.3	Barley	mitochondrion	83.13	62.59
CDX82807	Canola	cytosol	59.04	62.03
CDX76421	Canola	cytosol	61.45	62.01
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	61.45	61.63
KRH36796	Soybean	cytosol	59.94	61.42
KRH11784	Soybean	cytosol	59.94	61.42
KXG29722	Sorghum	cytosol	57.53	61.02
CDX94026	Canola	cytosol, mitochondrion, nucleus	62.05	60.95
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	61.75	60.83
EER88634	Sorghum	cytosol	59.94	60.12
KRH59111	Soybean	cytosol	59.34	60.06
Bra038783.1-P	Field mustard	cytosol	60.84	59.76
CDY58481	Canola	cytosol, mitochondrion, nucleus	60.84	59.76
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	60.24	59.52
CDY62002	Canola	mitochondrion	60.24	59.35
CDY21329	Canola	mitochondrion	60.24	59.35
TraesCS6B01G314300.1	Wheat	cytosol	79.82	59.28
KRH42994	Soybean	cytosol	58.43	59.15
CDY46364	Canola	cytosol, mitochondrion, nucleus	60.54	58.26
CDY39164	Canola	cytosol, mitochondrion, nucleus	59.64	58.24
KRH71995	Soybean	cytosol	18.98	57.8
CDY65341	Canola	plastid	61.75	55.26
Bra013508.1-P	Field mustard	cytosol	55.42	46.82
EER97836	Sorghum	cytosol	20.78	41.82
Bra024773.1-P	Field mustard	cytosol	36.14	41.38
EER99403	Sorghum	cytosol	20.78	40.35
EES01097	Sorghum	cytosol	18.67	37.35
EES18146	Sorghum	cytosol	42.77	36.88
EER97258	Sorghum	mitochondrion	17.77	35.33
CDY60369	Canola	cytosol	18.98	33.87
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	58.73	27.66
OQU88318	Sorghum	mitochondrion	17.17	22.8

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	EntrezGene:8071762	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5XZS8	EnsemblPlants:EES05611	ProteinID:EES05611
ProteinID:EES05611.1	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508
PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180
PANTHER:PTHR23180:SF291	SMART:SM00105	SMART:SM00239	EnsemblPlantsGene:SORBI_3004G256700	SUPFAM:SSF49562	SUPFAM:SSF57863
unigene:Sbi.2041	UniParc:UPI0001A85D07	RefSeq:XP_002452635.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:60264403..60268448

Molecular Weight (calculated)

36998.2 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.358

Length

332 amino acids

Sequence
(BLAST)

001: MSTANRYQHI KSTKPVVGKA RKLKDLMIKS DNRICADCGA PDPKWASANI GVFLCLKCGD VHRALGPDIS KVLSITLDDW SDSDIDSMLE VGGNSYANSI
101: YEAFLPKDHP KPKPDSTMEY RTKFIRAKYE TQDFLKPSLR ISSRSSFKST TSVKSVDNNF SSTSRKDVSE DTREFVGELN ITVVKGTNLA VRDMLTSDPY
201: VILTLGGQTA QSTVKKSDLN PVWNEVLKIS VPRNYGPLKL EIYDHDIFSA DDIMGEAEID LQPMITAAMA FGDTSRLGDM QIGRWFMTKD NALMKDSTVN
301: VVAGKVKQEV HLKLQNVESG EMELELEWVP IL

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.