CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006447_P001	Maize	mitochondrion	92.81	93.37
Os07t0501700-01	Rice	cytosol, mitochondrion	81.44	81.93
TraesCS2A01G229200.1	Wheat	endoplasmic reticulum, extracellular	77.25	77.71
HORVU6Hr1G091350.3	Barley	cytosol, endoplasmic reticulum	76.65	77.11
HORVU6Hr1G091440.1	Barley	cytosol, endoplasmic reticulum	76.65	77.11
TraesCS6D01G380000.1	Wheat	cytosol, extracellular	72.46	72.46
TraesCS6B01G434600.1	Wheat	extracellular	72.46	72.46
TraesCS6A01G394700.1	Wheat	cytosol, endoplasmic reticulum	71.86	71.86
TraesCS2D01G233200.1	Wheat	endoplasmic reticulum, extracellular	77.84	65.99
TraesCS2B01G250600.1	Wheat	extracellular, vacuole	56.89	65.52
EES01097	Sorghum	cytosol	55.69	56.02
EER99403	Sorghum	cytosol	52.69	51.46
EER97836	Sorghum	cytosol	48.5	49.09
OQU88318	Sorghum	mitochondrion	50.3	33.6
EER88634	Sorghum	cytosol	41.32	20.85
KXG29722	Sorghum	cytosol	36.53	19.49
EES05611	Sorghum	cytosol	35.33	17.77
EES18146	Sorghum	cytosol	35.93	15.58

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EntrezGene:8077475	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5X9B1
EnsemblPlants:EER97258	ProteinID:EER97258	ProteinID:EER97258.1	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168
PFscan:PS50004	PANTHER:PTHR23180	PANTHER:PTHR23180:SF321	SMART:SM00239	EnsemblPlantsGene:SORBI_3002G310900	SUPFAM:SSF49562
UniParc:UPI0001A834D2	RefSeq:XP_002460737.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:68475275..68477195

Molecular Weight (calculated)

18731.7 Da

IEP (calculated)

6.232

GRAVY (calculated)

-0.155

Length

167 amino acids

Sequence
(BLAST)

001: MECLLGLLKV RVVRGVHLAI CDPLTHSSDP YVVLRHGQQK VKSSIKYRTC NPEWNEELTL SITNMMNPVK IELFDHDTFT KDDSMGNAEF CILNFVEIAK
101: QDLSDVPDGT VMKSILPEKG GNCLATESHI TWKDGKVSQD IVLKLRNTET GELVLHLSWV NIPGVAR

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.