CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0609450-01	Rice	cytosol	33.84	81.16
GSMUA_Achr4P03900_001	Banana	cytosol	73.72	73.72
GSMUA_Achr9P22350_001	Banana	cytosol	73.72	73.27
KXG29722	Sorghum	cytosol	68.88	72.84
VIT_10s0003g04900.t01	Wine grape	cytosol	67.37	67.58
Bra029572.1-P	Field mustard	cytosol	55.29	66.3
Solyc02g024020.2.1	Tomato	cytosol, mitochondrion	65.26	65.26
CDX82807	Canola	cytosol	62.24	65.19
KRH36796	Soybean	cytosol	63.75	65.12
KRH11784	Soybean	cytosol	63.44	64.81
KRH59111	Soybean	cytosol	63.44	64.02
CDX76421	Canola	cytosol	62.54	62.92
KRH42994	Soybean	cytosol	61.93	62.5
AT4G21160.4	Thale cress	cytosol, mitochondrion, nucleus	62.84	61.72
CDY62002	Canola	mitochondrion	61.63	60.53
CDY21329	Canola	mitochondrion	61.63	60.53
CDX94026	Canola	cytosol, mitochondrion, nucleus	61.63	60.35
CDY58481	Canola	cytosol, mitochondrion, nucleus	61.33	60.06
Bra038783.1-P	Field mustard	cytosol	61.33	60.06
EES05611	Sorghum	cytosol	60.12	59.94
AT4G05330.1	Thale cress	cytosol, mitochondrion, nucleus	60.73	59.82
KRH71995	Soybean	cytosol	19.64	59.63
CDY46364	Canola	cytosol, mitochondrion, nucleus	61.93	59.42
CDY39164	Canola	cytosol, mitochondrion, nucleus	60.12	58.53
CDY65341	Canola	plastid	62.84	56.06
Zm00001d036830_P005	Maize	plastid	92.45	51.95
EER97836	Sorghum	cytosol	24.17	48.48
Bra013508.1-P	Field mustard	cytosol	56.8	47.84
EES01097	Sorghum	cytosol	22.05	43.98
Bra024773.1-P	Field mustard	cytosol	36.56	41.72
EER99403	Sorghum	cytosol	21.45	41.52
EER97258	Sorghum	mitochondrion	20.85	41.32
EES18146	Sorghum	cytosol	47.43	40.78
CDY60369	Canola	cytosol	19.64	34.95
CDX79040	Canola	cytosol, mitochondrion, nucleus, plastid	62.24	29.22
OQU88318	Sorghum	mitochondrion	20.54	27.2

Protein Annotations

Gene3D:2.60.40.150	MapMan:22.3.4.3	Gene3D:3.30.40.160	EntrezGene:8082277	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5Z5R3	EnsemblPlants:EER88634	ProteinID:EER88634
ProteinID:EER88634.1	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508
PFAM:PF00168	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180
PANTHER:PTHR23180:SF245	SMART:SM00105	SMART:SM00239	EnsemblPlantsGene:SORBI_3010G188600	SUPFAM:SSF49562	SUPFAM:SSF57863
unigene:Sbi.8452	UniParc:UPI0001A89402	RefSeq:XP_002437267.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:52907122..52910518

Molecular Weight (calculated)

36654.7 Da

IEP (calculated)

6.267

GRAVY (calculated)

-0.345

Length

331 amino acids

Sequence
(BLAST)

001: MSSRYRADRG RAASDMTRKL RELLQKSDNR ICADCSAPDP KWASANIGVF ICLKCSGVHR SLGTHVSKVL SVTLDQWADD EINSMIEVGG NSYANAIYEA
101: FLPEGYHKPH PDSSQEERAD FIRSKYELQE FLKPSLRLVS NKGSLEATSS RKHTGSNVSL SASFNSEAGM VEFIGILKVK VIRGTKLAVR DLISSDPYVV
201: LTLGQQKAKT SVIKRNLNPV WNEELKLSVP QQYGPLKLQV FDHDMLSKDD KMGDAEIDLQ PMISAATAFG DPDLLADMQI GKWLKSPDNA LARDSAVNVI
301: SGKVKQEVSL MLQNVESGEV ELELEWIPLN Q

Best Arabidopsis Sequence Match ( AT4G21160.4 )
(BLAST)

001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ

Arabidopsis Description

AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.