Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015804_P005 | Maize | cytosol, mitochondrion | 92.97 | 90.37 |
| Os02t0198300-02 | Rice | plasma membrane | 82.11 | 80.31 |
| HORVU6Hr1G032940.1 | Barley | cytosol | 81.79 | 79.26 |
| TraesCS6B01G190600.1 | Wheat | cytosol | 81.15 | 78.64 |
| TraesCS6A01G160700.1 | Wheat | cytosol | 80.83 | 78.33 |
| TraesCS6D01G152000.1 | Wheat | cytosol | 81.47 | 74.78 |
| EER88634 | Sorghum | cytosol | 72.84 | 68.88 |
| GSMUA_Achr9P22350_001 | Banana | cytosol | 69.33 | 65.17 |
| GSMUA_Achr4P03900_001 | Banana | cytosol | 68.05 | 64.35 |
| Bra029572.1-P | Field mustard | cytosol | 55.91 | 63.41 |
| VIT_10s0003g04900.t01 | Wine grape | cytosol | 65.81 | 62.42 |
| KRH36796 | Soybean | cytosol | 64.22 | 62.04 |
| KRH11784 | Soybean | cytosol | 63.58 | 61.42 |
| Solyc02g024020.2.1 | Tomato | cytosol, mitochondrion | 63.58 | 60.12 |
| CDX82807 | Canola | cytosol | 60.38 | 59.81 |
| AT4G21160.4 | Thale cress | cytosol, mitochondrion, nucleus | 63.58 | 59.05 |
| CDX76421 | Canola | cytosol | 61.98 | 58.97 |
| CDY62002 | Canola | mitochondrion | 62.62 | 58.16 |
| CDY21329 | Canola | mitochondrion | 62.62 | 58.16 |
| CDX94026 | Canola | cytosol, mitochondrion, nucleus | 62.62 | 57.99 |
| KRH42994 | Soybean | cytosol | 60.7 | 57.93 |
| KRH59111 | Soybean | cytosol | 60.38 | 57.62 |
| EES05611 | Sorghum | cytosol | 61.02 | 57.53 |
| AT4G05330.1 | Thale cress | cytosol, mitochondrion, nucleus | 61.66 | 57.44 |
| CDY46364 | Canola | cytosol, mitochondrion, nucleus | 63.26 | 57.39 |
| KRH71995 | Soybean | cytosol | 19.81 | 56.88 |
| CDY58481 | Canola | cytosol, mitochondrion, nucleus | 61.34 | 56.8 |
| Bra038783.1-P | Field mustard | cytosol | 61.34 | 56.8 |
| CDY39164 | Canola | cytosol, mitochondrion, nucleus | 61.34 | 56.47 |
| CDY65341 | Canola | plastid | 62.3 | 52.56 |
| Bra013508.1-P | Field mustard | cytosol | 55.27 | 44.02 |
| Bra024773.1-P | Field mustard | cytosol | 37.06 | 40.0 |
| EER97836 | Sorghum | cytosol | 20.77 | 39.39 |
| EER99403 | Sorghum | cytosol | 21.09 | 38.6 |
| EES18146 | Sorghum | cytosol | 46.33 | 37.66 |
| EES01097 | Sorghum | cytosol | 19.49 | 36.75 |
| EER97258 | Sorghum | mitochondrion | 19.49 | 36.53 |
| CDY60369 | Canola | cytosol | 21.09 | 35.48 |
| CDX79040 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.06 | 26.67 |
| OQU88318 | Sorghum | mitochondrion | 17.25 | 21.6 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:22.3.4.3 | Gene3D:3.30.40.160 | UniProt:A0A194YNE0 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR000008 | InterPro:IPR001164 |
| InterPro:IPR035892 | InterPro:IPR038508 | EnsemblPlants:KXG29722 | ProteinID:KXG29722 | ProteinID:KXG29722.1 | PFAM:PF00168 |
| PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50004 | PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF245 |
| SMART:SM00105 | SMART:SM00239 | EnsemblPlantsGene:SORBI_3004G081100 | SUPFAM:SSF49562 | SUPFAM:SSF57863 | UniParc:UPI0007F1E902 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:6663142..6666618
Molecular Weight (calculated)
34007.4 Da
IEP (calculated)
5.071
GRAVY (calculated)
-0.249
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSANMAKL KELLQRSENH SCADCGAPDP KWASANIGVF ICVKCSGVHR SLGTHISKVL SVTLDKWSDS EVDSMIEVGG NSQANAIYEA FLPEGYQKPH
101: PDSTQEVREK FIRSKYELQE FLKPSLRIVS HHPSDSGKHG GNASHSDGSK SQVGMIEFIG ILNVKVIGGT NLAIRDMSSS DPYVVLTLGQ QKAQTSVING
201: NLNPVWNEEL KLCSSALWTS EAVFDHDMVS KDDLMGQAEI DLQTMINAAA AFGDPELLGD IQIGRWLKSE DNALVRDSAV VVSGGKVKQG VALKLQHTES
301: GELELEMEWM PLV
101: PDSTQEVREK FIRSKYELQE FLKPSLRIVS HHPSDSGKHG GNASHSDGSK SQVGMIEFIG ILNVKVIGGT NLAIRDMSSS DPYVVLTLGQ QKAQTSVING
201: NLNPVWNEEL KLCSSALWTS EAVFDHDMVS KDDLMGQAEI DLQTMINAAA AFGDPELLGD IQIGRWLKSE DNALVRDSAV VVSGGKVKQG VALKLQHTES
301: GELELEMEWM PLV
001: MSYSGAGLGK PGSGKRRIRD LLTQSDNRVC ADCGAPDPKW ASANIGVFIC LKCCGVHRSL GSHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFI
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ
101: PEGSSKPGPD ASHDQRMRFI RSKYEHQEFL KPSLRITSVR GSSTKTPAFL SSSLSKKIVD SFRTNSSSQQ PQLEGMVEFI GLLKVTIKKG TNMAIRDMMS
201: SDPYVVLTLG QQKAQSTVVK SNLNPVWNEE LMLSVPHNYG SVKLQVFDYD TFSADDIMGE AEIDIQPLIT SAMAFGDPEM FGDMQIGKWL KSHDNALIED
301: SIINIADGKV KQEVQIKLQN VESGELELEM EWLPLEQ
Arabidopsis Description
AGD12ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.