CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	77.2	88.94
TraesCS2D01G262500.1	Wheat	cytosol	48.0	70.59
TraesCS2B01G280800.1	Wheat	cytosol	47.6	70.0
TraesCS2A01G261400.1	Wheat	cytosol	47.6	70.0
HORVU2Hr1G063790.1	Barley	cytosol	47.6	70.0
EER97836	Sorghum	cytosol	38.0	57.58
GSMUA_Achr10P...	Banana	cytosol	37.2	56.36
GSMUA_Achr9P25020_001	Banana	cytosol	36.8	55.76
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	36.0	54.55
GSMUA_Achr8P15780_001	Banana	mitochondrion	35.6	53.94
EES01097	Sorghum	cytosol	33.6	50.6
EER97258	Sorghum	mitochondrion	33.6	50.3
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	36.8	50.27
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	30.8	46.67
EER99403	Sorghum	cytosol	30.0	43.86
EER88634	Sorghum	cytosol	27.2	20.54
Os07t0108500-01	Rice	mitochondrion	13.6	18.58
KXG29722	Sorghum	cytosol	21.6	17.25
EES05611	Sorghum	cytosol	22.8	17.17
EES18146	Sorghum	cytosol	26.0	16.88

Protein Annotations

MapMan:11.1.2.1.2	Gene3D:2.60.40.150	Gene3D:4.10.1050.10	UniProt:A0A1W0W1P8	InterPro:At2g23090-like	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR026939	InterPro:IPR035892	EnsemblPlants:OQU88318	ProteinID:OQU88318
ProteinID:OQU88318.1	PFAM:PF00168	PFAM:PF04419	PFAM:PF12907	PFscan:PS50004	PANTHER:PTHR23180
PANTHER:PTHR23180:SF379	SMART:SM00239	EnsemblPlantsGene:SORBI_3002G010200	SUPFAM:SSF118359	SUPFAM:SSF49562	UniParc:UPI0009DC8324
InterPro:Uncharacterised_SERF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:975810..981235

Molecular Weight (calculated)

27366.0 Da

IEP (calculated)

7.787

GRAVY (calculated)

-0.353

Length

250 amino acids

Sequence
(BLAST)

001: MSTLPGGFLS VRVLRGINLV SCDAKGSDPY VVISLDGQKL KTSVMKKTVN PVWNEDLTLA VMDASAPIKL EVFDKDTFSK DDMMGDAEFD IEALVQMIQM
101: DLEDIRSGTV VRTVRPGGKD SCLADESHII WDNGQVVQDI LLKLRNVHTG VVHLQLKWVT IPGDQGAGGG ASAMGGGNGQ KSKMARERNA EKNKGSKGSQ
201: LETNKKAMNI QCKICMQTFI CTTSEAKCKE HAEARHPKND LYQCFPHLKN

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.