Factsheet for GSMUA_Achr9P25020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15780_001	Banana	mitochondrion	79.39	79.39
GSMUA_Achr10P...	Banana	cytosol	78.18	78.18
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	67.27	67.27
EER97836	Sorghum	cytosol	64.24	64.24
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	64.24	64.24
GSMUA_Achr10P...	Banana	cytosol	62.42	63.58
GSMUA_Achr6P07630_001	Banana	cytosol	63.03	62.65
GSMUA_Achr2P15950_001	Banana	cytosol	63.64	60.69
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	66.06	59.56
Os07t0108400-01	Rice	cytosol	61.82	58.62
TraesCS2A01G261500.1	Wheat	cytosol	56.36	57.76
HORVU2Hr1G063790.1	Barley	cytosol	55.15	53.53
TraesCS2D01G262500.1	Wheat	cytosol	53.94	52.35
TraesCS2B01G280800.1	Wheat	cytosol	52.73	51.18
TraesCS2A01G261400.1	Wheat	cytosol	52.12	50.59
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	54.55	41.47
GSMUA_Achr4P13040_001	Banana	cytosol	41.21	39.77
OQU88318	Sorghum	mitochondrion	55.76	36.8
GSMUA_Achr2P05420_001	Banana	cytosol	30.3	33.11
GSMUA_Achr9P12760_001	Banana	cytosol	43.03	21.58
GSMUA_Achr9P22350_001	Banana	cytosol	43.03	21.32
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	41.82	19.88
GSMUA_Achr5P16180_001	Banana	cytosol	43.64	19.62
GSMUA_Achr4P03900_001	Banana	cytosol	38.79	19.34
GSMUA_Achr9P27900_001	Banana	cytosol	40.0	19.02
Os07t0108500-01	Rice	mitochondrion	15.76	14.21
GSMUA_Achr7P20210_001	Banana	cytosol	16.36	12.0

Protein Annotations

EnsemblPlants:GSMUA_Achr9P25020_001	EnsemblPlants:GSMUA_Achr9T25020_001	EnsemblPlantsGene:GSMUA_Achr9G25020_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002966657	UniProt:M0U3A9	MapMan:11.1.2.1.2

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:GMGC_GENE;Acc:GSMUA_Achr9G25020_001]

Coordinates

chr9:+:29657640..29659190

Molecular Weight (calculated)

18522.4 Da

IEP (calculated)

5.722

GRAVY (calculated)

-0.222

Length

165 amino acids

Sequence
(BLAST)

001: MDHLLGLLRV RVVRGVSLAY RDATGSDPYV VVRMGGQKLK TSVKKHNVNP VWNEDLTLTV SDPTQPVKIR VYDKDTFSRD DKMGDAEIDI VPFVEAVKMN
101: LSDIPNDTII KTMNPNRHNC LAEDSAIVWK EGKVVQDIIV RLRNVESGEL ELQLLWVDIP GAPGF

Best Arabidopsis Sequence Match ( AT1G48590.2 )
(BLAST)

001: MIVSFLYFSS LFPTSLRKIN LVAGEKHKDR RMKPSLMDSL LGLLRIRIKR GVNLAVRDLN SSDPYVVVKM AKQKLKTRVI YKNVNPEWNE DLTLSVSDPN
101: LTVLLTVYDY DTFTKDDKMG DAEFGIKPFV NALKMHLHDL PSGTIVTTVQ PSRDNCLAEE SRVIWSDGKL VQDIVLRLRH VECGEVEAQL QWIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.