Factsheet for GSMUA_Achr2P05420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P13040_001	Banana	cytosol	71.52	63.16
TraesCS5B01G166000.1	Wheat	cytosol	62.91	55.56
TraesCS5A01G169300.1	Wheat	cytosol	62.91	55.56
TraesCS5D01G173700.1	Wheat	cytosol	62.25	54.97
Os09t0251800-01	Rice	cytosol, plasma membrane	58.94	52.05
VIT_00s0531g00030.t01	Wine grape	cytosol	56.29	51.52
KRH11612	Soybean	cytosol	55.63	50.6
KRH36617	Soybean	cytosol	55.63	50.6
AT5G47710.1	Thale cress	cytosol	53.64	48.8
KRH51202	Soybean	cytosol	52.98	48.19
Zm00001d019836_P003	Maize	cytosol	59.6	47.87
PGSC0003DMT400038836	Potato	cytosol	51.66	46.15
Solyc04g015070.2.1	Tomato	cytosol	51.66	46.15
PGSC0003DMT400034618	Potato	cytosol	49.67	44.64
KRH25661	Soybean	cytosol	18.54	42.42
HORVU5Hr1G052010.2	Barley	cytosol	61.59	41.15
CDY40545	Canola	endoplasmic reticulum, extracellular	53.64	40.91
HORVU5Hr1G052030.1	Barley	cytosol	61.59	38.75
GSMUA_Achr10P...	Banana	cytosol	34.44	32.1
GSMUA_Achr6P07630_001	Banana	cytosol	35.1	31.93
GSMUA_Achr8P15780_001	Banana	mitochondrion	34.44	31.52
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	33.77	30.91
GSMUA_Achr2P15950_001	Banana	cytosol	35.1	30.64
GSMUA_Achr9P25020_001	Banana	cytosol	33.11	30.3
GSMUA_Achr10P...	Banana	cytosol	32.45	29.7
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	31.79	29.09
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	31.79	26.23
GSMUA_Achr9P12760_001	Banana	cytosol	33.11	15.2
GSMUA_Achr9P22350_001	Banana	cytosol	31.79	14.41
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	32.45	14.12
GSMUA_Achr9P27900_001	Banana	cytosol	32.45	14.12
GSMUA_Achr4P03900_001	Banana	cytosol	30.46	13.9
GSMUA_Achr5P16180_001	Banana	cytosol	33.77	13.9
GSMUA_Achr7P20210_001	Banana	cytosol	4.64	3.11

Protein Annotations

EnsemblPlants:GSMUA_Achr2P05420_001	EnsemblPlants:GSMUA_Achr2T05420_001	EnsemblPlantsGene:GSMUA_Achr2G05420_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF296	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000294F91D	UniProt:M0S5D3	MapMan:35.1	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G05420_001]

Coordinates

chr2:-:10527900..10529797

Molecular Weight (calculated)

16608.2 Da

IEP (calculated)

6.747

GRAVY (calculated)

-0.037

Length

151 amino acids

Sequence
(BLAST)

001: MHLKDGSVGS VDLKTGSAKT KVINSCLNPV WNEELIFTLK EPLGILNLEV FDRDRFKSDD KMGHAFLDLQ PLLSASKLKR ALQLTSGETK LRKVAPDCDN
101: CLLASSCITY VNGEIVMDAC LRLCDVESGE LYVTIKWIDH PSSAVAPVKK A

Best Arabidopsis Sequence Match ( AT5G47710.4 )
(BLAST)

001: MGEPLGLLQV TVIQGKKLVI RDFKSSDPYV IVKLGNESAK TKVINNCLNP VWNEELNFTL KDPAAVLALE VFDKDRFKAD DKMGHASLSL QPLISVARLR
101: HVVRVSSGET TLRKVLPDPE NCVSRESTIS CIDGEVVQSV WLRLCAVESG EIELKIKLID PPGTNK

Arabidopsis Description

CAR11Protein C2-DOMAIN ABA-RELATED 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.