Factsheet for GSMUA_Achr5P16180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	73.84	78.1
KRH13401	Soybean	cytosol	64.31	64.13
KRH20756	Soybean	cytosol	64.31	64.13
CDY69110	Canola	cytosol	16.35	63.83
Solyc08g043140.2.1	Tomato	cytosol	67.85	63.04
PGSC0003DMT400068533	Potato	cytosol	67.85	63.04
VIT_13s0019g00350.t01	Wine grape	cytosol	67.57	62.63
Bra040041.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	56.4	61.79
KRH30029	Soybean	cytosol	65.4	61.38
TraesCS1B01G251400.1	Wheat	cytosol	40.87	60.73
Os01t0951100-01	Rice	cytosol	62.94	60.63
AT3G07940.1	Thale cress	cytosol	63.22	60.26
CDY22145	Canola	cytosol	62.13	59.53
EES18146	Sorghum	cytosol	59.67	56.88
Zm00001d038063_P001	Maize	nucleus	59.13	56.36
TraesCS1A01G239200.1	Wheat	cytosol	57.49	56.27
Bra001277.1-P	Field mustard	cytosol	58.86	56.25
TraesCS1D01G239400.3	Wheat	cytosol	57.49	55.82
CDX74022	Canola	cytosol	58.31	55.73
KRH62915	Soybean	cytosol	53.13	55.56
CDY28007	Canola	cytosol	60.76	54.93
Os05t0382000-01	Rice	cytosol	58.86	54.68
Bra029688.1-P	Field mustard	cytosol	60.22	54.43
CDY35974	Canola	cytosol	60.22	54.43
GSMUA_Achr9P22350_001	Banana	cytosol	47.14	51.95
HORVU1Hr1G057260.3	Barley	cytosol	57.49	51.59
GSMUA_Achr4P03900_001	Banana	cytosol	46.05	51.06
GSMUA_Achr9P12760_001	Banana	cytosol	45.5	50.76
GSMUA_Achr9P27900_001	Banana	cytosol	45.5	48.13
TraesCS3B01G548000.1	Wheat	cytosol	61.58	47.48
GSMUA_Achr10P...	Banana	cytosol	20.71	46.91
HORVU3Hr1G108480.1	Barley	cytosol	60.76	46.46
GSMUA_Achr2P15950_001	Banana	cytosol	21.8	46.24
TraesCS3D01G494100.1	Wheat	cytosol	60.22	45.19
GSMUA_Achr7P20210_001	Banana	cytosol	27.52	44.89
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	19.89	44.24
GSMUA_Achr9P25020_001	Banana	cytosol	19.62	43.64
GSMUA_Achr8P15780_001	Banana	mitochondrion	19.62	43.64
GSMUA_Achr10P...	Banana	cytosol	19.35	43.03
GSMUA_Achr6P07630_001	Banana	cytosol	19.35	42.77
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	20.16	40.44
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	17.71	39.39
GSMUA_Achr4P13040_001	Banana	cytosol	17.17	36.84
GSMUA_Achr2P05420_001	Banana	cytosol	13.9	33.77
Zm00001d011855_P002	Maize	cytosol	59.95	20.93

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.30.40.160	MapMan:35.1	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr5G16180_001	EnsemblPlants:GSMUA_Achr5P16180_001	EnsemblPlants:GSMUA_Achr5T16180_001
InterPro:IPR000008	InterPro:IPR001164	InterPro:IPR035892	InterPro:IPR038508	UniProt:M0SYZ7	PFAM:PF00168
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50004	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF390
SMART:SM00105	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF57863	UniParc:UPI000296B7C7	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:GMGC_GENE;Acc:GSMUA_Achr5G16180_001]

Coordinates

chr5:+:13256705..13266862

Molecular Weight (calculated)

41048.0 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.409

Length

367 amino acids

Sequence
(BLAST)

001: MSTKQEYDDT SNSSGYSSPL GRLENLLSHP SNRYCADCGS PDPKWVSLNL GVFICIKCSG VHRSLGVHIS KVISVKLDDW TDEQVDSLID GGGNAAANAR
101: YEAFLPDNII KPKPDSSIDE RSEFIRRKYE LQQFSSSNVQ IGYAMSPDAN TSFQNNVTNN KLLEKQHTGI RHGLGHAFRN SWRKKETEHK AVKKMMGMVE
201: FVGLIKVNIV KGTNLAVRDM MTSDPYVILN LGHQARNFLL LQSMKTRVIK SSLNPVWNEK LMLSIPDPIP PLRLQVYDKD TFSTDDRMGE AEIDIQPLVA
301: AAKAYENSSI SESMQLGKWL ATDDNTLVKD SVISLVDGKV KQEITLKLQN VERGELEIEL ECVPLSQ

Best Arabidopsis Sequence Match ( AT3G07940.1 )
(BLAST)

001: MSLGQENVDP VEVSGSHACL YELLCSETPK WTPLRVEDLQ TSSSDPRDRL EKLLKQPGNK YCADCGSPEP KWVSLSLGVF ICIKCSGVHR SLGVHISKVL
101: SVKLDEWTDD QVDMLVGYGG NTAVNERFEA CNIDQSKKPK PDSTNEERND FIRKKYEQHQ FMDPKDGALC TYQQPSRTNT SPPSLCSASH RSTKNRIGHA
201: FRNSWGRRES DHKGPKKSNS MAGMVEFVGL IKVNVVKGTN LAVRDVMTSD PYVILALGQQ SVKTRVIKNN LNPVWNETLM LSIPEPMPPL KVLVYDKDTF
301: STDDFMGEAE IDIQPLVSAA KAYETSSIKE PMQLGSWVAS KENTLVSDGI ILLEDGKVKQ DISLRLQNVE RGVLEIQLEC LPLTQ

Arabidopsis Description

AGD11Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.