Factsheet for GSMUA_Achr6P00230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	73.33	73.33
GSMUA_Achr10P...	Banana	cytosol	64.24	64.24
GSMUA_Achr9P25020_001	Banana	cytosol	64.24	64.24
GSMUA_Achr8P15780_001	Banana	mitochondrion	63.03	63.03
GSMUA_Achr10P...	Banana	cytosol	53.33	54.32
GSMUA_Achr2P15950_001	Banana	cytosol	55.15	52.6
EER97836	Sorghum	cytosol	52.12	52.12
GSMUA_Achr6P07630_001	Banana	cytosol	51.52	51.2
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	54.55	49.18
HORVU2Hr1G063790.1	Barley	cytosol	48.48	47.06
Os07t0108400-01	Rice	cytosol	48.48	45.98
TraesCS2A01G261500.1	Wheat	cytosol	44.85	45.96
TraesCS2D01G262500.1	Wheat	cytosol	47.27	45.88
TraesCS2B01G280800.1	Wheat	cytosol	46.06	44.71
TraesCS2A01G261400.1	Wheat	cytosol	45.45	44.12
GSMUA_Achr4P13040_001	Banana	cytosol	41.82	40.35
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	46.06	35.02
GSMUA_Achr2P05420_001	Banana	cytosol	29.09	31.79
OQU88318	Sorghum	mitochondrion	46.67	30.8
GSMUA_Achr9P12760_001	Banana	cytosol	43.64	21.88
GSMUA_Achr9P22350_001	Banana	cytosol	41.21	20.42
GSMUA_Achr9P27900_001	Banana	cytosol	42.42	20.17
GSMUA_Achr4P03900_001	Banana	cytosol	40.0	19.94
GSMUA_Achr5P16180_001	Banana	cytosol	39.39	17.71
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	36.36	17.29
Os07t0108500-01	Rice	mitochondrion	15.15	13.66
GSMUA_Achr7P20210_001	Banana	cytosol	15.76	11.56

Protein Annotations

EnsemblPlants:GSMUA_Achr6P00230_001	EnsemblPlants:GSMUA_Achr6T00230_001	EnsemblPlantsGene:GSMUA_Achr6G00230_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002969B8C	UniProt:M0T2X1	MapMan:11.1.2.1.2

Description

Putative Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:GMGC_GENE;Acc:GSMUA_Achr6G00230_001]

Coordinates

chr6:+:173813..177087

Molecular Weight (calculated)

18287.8 Da

IEP (calculated)

4.190

GRAVY (calculated)

-0.278

Length

165 amino acids

Sequence
(BLAST)

001: MENVTGLLRV RVVRGVNLAK RDAGDSDAYV VVLMGDQKLK TNVKKNSLNP EWNEDLNFCV SDPTQPLKIE IYDKDTLTQD DKMGDAELDI QQFMEAVKMG
101: LADLPNGFVI ETMRPSQQNC LAGDSTITSK DGTIAQDVVL QLRNVESGNV ELQLLWLSVP CAPDF

Best Arabidopsis Sequence Match ( AT1G23140.1 )
(BLAST)

001: MENLVGLLRI RVKRGINLVS RDSNTSDPFV VVTMGSQKLK TRGVENSCNP EWDDELTLGI NDPNQHVTLE VYDKDTFTSH DPMGDAEIDI KPFFEVQGTD
101: IQELTNGTEI RRVKPSGDNC LAEESRIIFS NGKILQDMIL QLRNVESGEV EIQIEWINVT GSSDF

Arabidopsis Description

CAR8Protein C2-DOMAIN ABA-RELATED 8 [Source:UniProtKB/Swiss-Prot;Acc:O49303]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.