Factsheet for GSMUA_Achr1P08400_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	60.66	67.27
GSMUA_Achr9P25020_001	Banana	cytosol	59.56	66.06
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	59.56	66.06
GSMUA_Achr8P15780_001	Banana	mitochondrion	59.02	65.45
GSMUA_Achr10P...	Banana	cytosol	57.38	64.81
EER97836	Sorghum	cytosol	55.19	61.21
GSMUA_Achr6P07630_001	Banana	cytosol	54.64	60.24
GSMUA_Achr2P15950_001	Banana	cytosol	56.28	59.54
Os07t0108400-01	Rice	cytosol	56.28	59.2
TraesCS2A01G261500.1	Wheat	cytosol	50.82	57.76
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	49.18	54.55
HORVU2Hr1G063790.1	Barley	cytosol	48.09	51.76
TraesCS2D01G262500.1	Wheat	cytosol	47.54	51.18
TraesCS2B01G280800.1	Wheat	cytosol	46.99	50.59
TraesCS2A01G261400.1	Wheat	cytosol	45.9	49.41
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	48.63	41.01
GSMUA_Achr4P13040_001	Banana	cytosol	36.61	39.18
OQU88318	Sorghum	mitochondrion	50.27	36.8
GSMUA_Achr2P05420_001	Banana	cytosol	26.23	31.79
GSMUA_Achr9P12760_001	Banana	cytosol	40.44	22.49
GSMUA_Achr9P22350_001	Banana	cytosol	38.8	21.32
GSMUA_Achr9P27900_001	Banana	cytosol	39.34	20.75
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	39.34	20.75
GSMUA_Achr5P16180_001	Banana	cytosol	40.44	20.16
GSMUA_Achr4P03900_001	Banana	cytosol	35.52	19.64
Os07t0108500-01	Rice	mitochondrion	14.75	14.75
GSMUA_Achr7P20210_001	Banana	cytosol	14.75	12.0

Protein Annotations

EnsemblPlants:GSMUA_Achr1P08400_001	EnsemblPlants:GSMUA_Achr1T08400_001	EnsemblPlantsGene:GSMUA_Achr1G08400_001	InterPro:C2_dom	InterPro:IPR000008	PANTHER:PTHR23180
PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI000296DDAA	UniProt:M0RY48	MapMan:11.1.2.1.2	:	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:GMGC_GENE;Acc:GSMUA_Achr1G08400_001]

Coordinates

chr1:-:6446165..6451495

Molecular Weight (calculated)

20626.1 Da

IEP (calculated)

9.434

GRAVY (calculated)

-0.425

Length

183 amino acids

Sequence
(BLAST)

001: MVPRRRKAER VEHLLGLLKV RVLRGVNLAY RDARGSDPYV VLRMGSQKVK TGVKKKNVNP EWNEELTLSV SDHIQPIKLE VYDKDTFSRD DQMGEAELDI
101: LPLLEAAKMD LSGVPDSSII TSVKPGRQNC LVGESHIKWM GGKLVQDIIL RLRNVECGEV ELQLTWVKNS GGSSYGNKSF MHQ

Best Arabidopsis Sequence Match ( AT1G48590.1 )
(BLAST)

001: MKPSLMDSLL GLLRIRIKRG VNLAVRDLNS SDPYVVVKMA KQKLKTRVIY KNVNPEWNED LTLSVSDPNL TVLLTVYDYD TFTKDDKMGD AEFGIKPFVN
101: ALKMHLHDLP SGTIVTTVQP SRDNCLAEES RVIWSDGKLV QDIVLRLRHV ECGEVEAQLQ WIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.