Factsheet for GSMUA_Achr4P13040_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05420_001	Banana	cytosol	63.16	71.52
TraesCS5D01G173700.1	Wheat	cytosol	71.34	71.34
TraesCS5B01G166000.1	Wheat	cytosol	71.34	71.34
TraesCS5A01G169300.1	Wheat	cytosol	71.34	71.34
KRH25661	Soybean	cytosol	26.9	69.7
Os09t0251800-01	Rice	cytosol, plasma membrane	69.59	69.59
VIT_00s0531g00030.t01	Wine grape	cytosol	62.57	64.85
KRH11612	Soybean	cytosol	60.82	62.65
KRH36617	Soybean	cytosol	60.23	62.05
KRH51202	Soybean	cytosol	59.06	60.84
Zm00001d019836_P003	Maize	cytosol	66.67	60.64
AT5G47710.1	Thale cress	cytosol	56.73	58.43
PGSC0003DMT400038836	Potato	cytosol	57.31	57.99
PGSC0003DMT400034618	Potato	cytosol	56.73	57.74
Solyc04g015070.2.1	Tomato	cytosol	56.73	57.4
HORVU5Hr1G052010.2	Barley	cytosol	69.59	52.65
CDY40545	Canola	endoplasmic reticulum, extracellular	58.48	50.51
HORVU5Hr1G052030.1	Barley	cytosol	69.59	49.58
GSMUA_Achr10P...	Banana	cytosol	42.11	44.44
GSMUA_Achr2P13810_001	Banana	cytosol, mitochondrion	42.69	44.24
GSMUA_Achr8P15780_001	Banana	mitochondrion	41.52	43.03
GSMUA_Achr6P07630_001	Banana	cytosol	41.52	42.77
GSMUA_Achr2P15950_001	Banana	cytosol	42.69	42.2
GSMUA_Achr10P...	Banana	cytosol	40.35	41.82
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	40.35	41.82
GSMUA_Achr9P25020_001	Banana	cytosol	39.77	41.21
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	39.18	36.61
GSMUA_Achr9P12760_001	Banana	cytosol	40.35	20.97
GSMUA_Achr4P03900_001	Banana	cytosol	40.35	20.85
GSMUA_Achr9P27900_001	Banana	cytosol	40.94	20.17
GSMUA_Achr9P22350_001	Banana	cytosol	38.01	19.52
GSMUA_Achr5P16180_001	Banana	cytosol	36.84	17.17
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	33.92	16.71
GSMUA_Achr7P20210_001	Banana	cytosol	14.62	11.11

Protein Annotations

EnsemblPlants:GSMUA_Achr4P13040_001	EnsemblPlants:GSMUA_Achr4T13040_001	EnsemblPlantsGene:GSMUA_Achr4G13040_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF245	PFAM:PF00168	PFscan:PS50004
PRINTS:PR00360	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00029637EC	UniProt:M0SNG9
MapMan:35.1	:	:	:	:	:

Description

Putative ADP-ribosylation factor GTPase-activating protein AGD12 [Source:GMGC_GENE;Acc:GSMUA_Achr4G13040_001]

Coordinates

chr4:+:9734667..9737006

Molecular Weight (calculated)

19191.4 Da

IEP (calculated)

9.222

GRAVY (calculated)

-0.124

Length

171 amino acids

Sequence
(BLAST)

001: MEEGAGVLKV IVSKGKSLAI RDFTSSDPYV VVKLGKQTAK TKVINSCLNP VWNEELSFSV KEPLGVLKLE VFDRDRFKFD DKMGHAFLNL QPLTSALKLK
101: RALQLTTGET KLRKVAPDSD NCLLADSFIT YANGEIIMDV RLRLCDVESG EVFVTVKWID HPTTPIHVRK R

Best Arabidopsis Sequence Match ( AT5G47710.4 )
(BLAST)

001: MGEPLGLLQV TVIQGKKLVI RDFKSSDPYV IVKLGNESAK TKVINNCLNP VWNEELNFTL KDPAAVLALE VFDKDRFKAD DKMGHASLSL QPLISVARLR
101: HVVRVSSGET TLRKVLPDPE NCVSRESTIS CIDGEVVQSV WLRLCAVESG EIELKIKLID PPGTNK

Arabidopsis Description

CAR11Protein C2-DOMAIN ABA-RELATED 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.